Entry
Name
(GenBank) putative transmembrane protein
KO
K11906 type VI secretion system protein VasD
Organism
cfu Collimonas fungivorans
Pathway
Brite
KEGG Orthology (KO) [BR:cfu00001 ]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CFU_0076
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:cfu02044 ]
CFU_0076
Secretion system [BR:cfu02044 ]
Type VI secretion system
Imp/Vas secretion system core components
CFU_0076
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
110715..111314
Genome browser
AA seq
199 aa AA seq DB search
MRPLSLLVSLAAILSLAGCAAGAVSAIGSVASSVLQMSGITKPEVPDAQKPPRTIAIKLH
AGSNLNADSSGTPLALVARVYKLRQNGAFQQATYDTFTNPQKEKDVLGADLIEVKEITLV
PGQRYEVSEKVTREAGFVGIVALFRKPAAQRWKVTFPTEAAEKSGITVGANACALTVGTG
VTVAETGAATKLLTPAPCG
NT seq
600 nt NT seq +upstream nt +downstream nt
atgcgccccttatctctcctggtttcgctggccgcaatactgagtttggctggttgcgcc
gcaggcgccgtttccgcgatcggctctgtcgccagttctgtattgcagatgtcaggcatc
accaagccagaggttcccgatgctcaaaaaccgccgcgcaccatagcgatcaagctgcat
gcaggcagcaatttgaacgccgacagctccggtacgccgcttgccctggtcgccagagta
tataagttacgacaaaatggtgctttccaacaggctacatacgatacatttaccaatccg
cagaaagaaaaagacgtattgggcgccgatttgatcgaagtcaaggaaattacactggtt
cctggacaacgttatgaagtcagcgaaaaagtcaccagggaagcgggttttgtcgggatt
gtggccttgttccgcaagcccgcggcacaacgctggaaggtgactttcccgaccgaggct
gcggaaaaatcaggcattaccgttggcgccaacgcctgtgcgctgacagtcggcaccggc
gtcacggttgcggaaaccggcgctgcgactaaacttttaaccccggccccatgcggctag