Collimonas fungivorans: CFU_0342
Help
Entry
CFU_0342 CDS
T01583
Name
(GenBank) hypothetical protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
cfu
Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfu03000
]
CFU_0342
Transcription factors [BR:
cfu03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CFU_0342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
LacI
HTH_3
HTH_Tnp_ISL3
DUF7433
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AEK60180
UniProt:
G0AEP5
LinkDB
All DBs
Position
complement(439795..440820)
Genome browser
AA seq
341 aa
AA seq
DB search
MNPTMTDVAKEAGVGVATVDRVINKRASVRPETAQRVLEAAENLGFRRAGLIRHRIDERM
AGYRLGFILQKRSTHFYRALGEALIVAAQMQTAPHGKAIVEFLDELTPQHMVAKLHELSS
KVDAIAIVAADHPQISQAIGQLSAQGTPVFALISDLTAEACAGYVGLDQRKVGRTAAWAI
SRLSSVPGKVGLMVGSHRYLCQEQAEISFRSYFREYAPEFQVLETLISLEDIHLAQVATL
DLLKRHPDLVGIYVAGGGIEGVIQALQEGDGPPGLVTVCPDLTEITRQALIDGRVDMVIS
HPQEWMARRLVEVMSDAICAKGTKDSVQSILPFTTYTAANV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaacccaacgatgacggatgtagcaaaggaagccggcgtcggcgtagcgaccgtcgat
cgggtgatcaacaagagggcaagcgtacggccggaaaccgcacagcgagtattggaggcg
gcggaaaacctcggctttcgccgcgccgggctgattcgccatcgcatcgacgagagaatg
gccggctaccggctcggattcatcctgcaaaaacgcagcacccacttctaccgcgcactg
ggcgaagcgctgatcgtcgccgcacagatgcaaaccgccccgcacgggaaagccattgtc
gaatttctcgatgaactgacgccgcagcacatggtcgcaaagctgcatgaactcagcagc
aaggtggatgctatcgccatcgtagccgctgaccatccgcagatcagtcaggcgatcggc
cagctcagcgcccagggcacgcctgtgttcgcactgatttcggatctgaccgccgaggca
tgcgccggctatgtcggactcgatcaacgcaaagtcggccgcacggcggcatgggccatc
tctcgcctcagcagcgttccggggaaggtcggcctcatggtgggcagccaccgctacctg
tgccaagagcaggccgaaatcagcttccgctcctattttcgcgaatacgcaccggaattt
caggtgctggaaaccttgatcagcctggaggacatccatctggctcaagtagccacactg
gatttgttgaagcgccacccggacttggtcggtatctatgtggctggcggcgggatcgag
ggagtgattcaggctctgcaagaaggcgacgggccacccggactcgtcacggtctgcccc
gacctgaccgagatcacccggcaggcgctgatcgatggccgggtcgacatggtcatttcg
catccgcaggaatggatggcccgccgcctggtcgaggtgatgtctgacgccatttgtgcc
aagggcacaaaagattcggtgcagagtattctgccgtttaccacctacactgcagcgaac
gtctaa
DBGET
integrated database retrieval system
