Collimonas fungivorans: CFU_0534
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Entry
CFU_0534 CDS
T01583
Symbol
fadB
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase-like protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00071
Fatty acid degradation
cfu00362
Benzoate degradation
cfu00650
Butanoate metabolism
cfu01100
Metabolic pathways
cfu01120
Microbial metabolism in diverse environments
cfu01200
Carbon metabolism
cfu01212
Fatty acid metabolism
Module
cfu_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CFU_0534 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CFU_0534 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CFU_0534 (fadB)
Enzymes [BR:
cfu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CFU_0534 (fadB)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
AEK60370
UniProt:
G0AHU2
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All DBs
Position
633353..635740
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AA seq
795 aa
AA seq
DB search
MSNFIVKKVAVLGAGVMGAQIAAHCLNAKVPVVLFDLPAKEGPKNGIVLRAIENLKKLSP
APLGNKDDASLIEVANYEDNLDVLAGCDLIIEAIAERMDWKHDLYKKVAPHIAPNAIFAS
NTSGLSITALSEGFDAELKARFCGVHFFNPPRYMHLVELIPTATTKPEILDQLEGFLATT
LGKGVVRAKDTPNFIANRVGVFGILSTVHQADKFGLSVDVVDDLTGAKLGRAKSGTFRTA
DVVGLDTMGHVIKTMQDNLKDDPFYGVYATPPLLAKLVEQGALGQKAGAGFYKKVGKDIL
RIDAAKGEYVTGGGKADELVARILKDKDPVKRMKTLRESTNPQAQFLWAIFRDGFHYIAV
HMESIADNARDIDFAMRWGFGWSVGPFEIWQAADWKQIAGWVKEDIDAGKALCNAPLPAW
VFDGRTGVHAADGSYSPAKKANVARSTLPVYERQVFRAPLLGEGVADGKTAGTTVFEDDS
VRAWHQNDDVLVLSFKTKMHVIGPGVIAGLNKAVAEAEKNYKGLVLWHADAAEGGAFSAG
ADLQSMLPLFMSGGAKAIEPMVAELQQAFMGLKYASVPVVAAVAGLALGGGCELALHTAK
RVASIESYIGLVEVGVGLIPAGGGLKEAAVRAANDAKGNDILQFLKTSFLNAATANVSKS
ALQAKSMGYLKADDVIVFNAYELLHVAKVEARAMFDAGYRPPLKAQIAVTGRYGVATIMA
QLVNMRDGGFISAHDYKLGTMIANIVCGGEVEEGSVVNEQWLLDLERKAFVELLNNPKTQ
ERIMGMMQTGKPVRN
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaatttcatcgttaaaaaagtcgccgtcctcggcgccggcgtgatgggtgcgcaa
attgccgcccactgcctgaacgccaaggtgccggtagtgctgttcgacctgccggccaag
gaaggcccgaaaaacggcatcgtcctgcgcgctatcgaaaacctgaagaagctcagcccc
gcgccgctcggcaacaaggatgacgcctcgctgatcgaagtcgccaactacgaagacaac
ctggatgtgctggccggctgcgacctgatcatcgaagccatcgccgagcgcatggactgg
aaacatgacctgtacaagaaggtcgcgccgcatatcgcgccgaacgccatcttcgcttcc
aatacttcaggcctgtcgatcaccgccttgtcggaaggtttcgacgctgaactgaaagca
cgcttctgcggcgtccacttcttcaacccgccgcgctacatgcacctggtggaattgatt
cctaccgccaccaccaagccagagatcctcgaccagctggaaggtttcctggcgacgacg
ctgggcaagggcgttgtgcgcgctaaagatacccctaacttcatcgccaaccgcgtaggc
gtgttcggcatcctgtcgaccgtgcaccaggctgacaaattcggcctctcggtcgacgtt
gtggatgacctgaccggcgccaagctgggccgcgccaaatcgggtaccttccgtaccgcc
gacgtggtcgggctggacaccatgggccatgtgatcaaaaccatgcaggacaacctgaag
gacgatcctttctacggcgtgtatgccacgccgccgctgctggccaagctggtcgagcag
ggcgcgctgggccagaaggccggcgccggtttctacaagaaggtcggcaaggacatcctg
cgcattgacgccgccaagggcgaatacgtcaccggcggcggcaaggccgacgaactggtg
gcacgcatcctgaaagacaaggatccagtcaagcgcatgaaaaccctgcgcgaatcgact
aatccgcaggcgcagttcctgtgggccattttccgcgacggcttccactacattgcagtc
cacatggaatcgattgccgacaacgcgcgcgacatcgatttcgccatgcgctggggcttc
ggctggagcgtaggcccgttcgaaatctggcaagccgccgactggaaacagatcgccggc
tgggtcaaggaagacatcgacgccggcaaggcgctgtgcaatgcaccgctgccagcctgg
gtattcgacggccgcaccggtgtgcacgctgccgacggttcttattcgccagcgaagaaa
gccaacgtcgcccgctccactttgccagtctacgagcgccaggtgttccgcgcaccgttg
ctgggtgaaggcgtggccgacggcaagactgccggcaccaccgtattcgaggatgactcg
gtacgcgcatggcaccagaacgacgacgtcctggtcctgtccttcaagaccaagatgcac
gtgatcggacctggcgtcatcgccggcctgaacaaggcggtggccgaagcagaaaagaat
tacaagggcctggtgctatggcacgcggatgcagccgaaggcggcgcattctcggccggc
gccgacctgcagtcgatgctgcctttgttcatgtcgggcggcgccaaggcgatcgaaccg
atggtcgccgagttgcagcaggcattcatgggcctcaagtacgccagcgtaccggtagtt
gctgcggtggccggcctggcgctgggcggcggctgcgagctggccttgcacacagccaag
cgtgtggcctcgatcgagtcgtatatcggcctggttgaagtcggcgtcggcctgatcccg
gccggcggcggtttgaaggaagcggcagtacgcgccgccaacgacgccaagggcaacgac
atcctgcaattcctgaagacctctttcctcaacgccgccaccgccaatgtctcgaaatcg
gccttgcaagcgaagagcatgggctacctgaaggccgacgacgtgatcgtgttcaatgcc
tacgagctgctgcatgtggccaaggtcgaagcgcgcgccatgttcgacgccggctatcgt
ccaccgctgaaagcgcagatcgcagtcactggccgttacggcgtcgccaccatcatggcg
cagctggtcaacatgcgcgacggcggtttcatctccgcccatgactacaagctgggcacc
atgatcgccaacatcgtttgcggcggcgaagtggaagaaggcagcgtggtgaatgaacaa
tggttgctggacctggaacgcaaagcgttcgtcgaactgctgaacaaccccaagacgcaa
gagcggatcatgggcatgatgcagaccggcaaaccagtgcgcaactaa
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