| Entry |
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| Name |
(GenBank) Exoribonuclease II
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| KO |
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| Organism |
cfu Collimonas fungivorans
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| Brite |
KEGG Orthology (KO) [BR:cfu00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:cfu03016]
CFU_0785
Enzymes [BR:cfu01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CFU_0785
Transfer RNA biogenesis [BR:cfu03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CFU_0785
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
919406..921493
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| AA seq |
695 aa
MNLFFEESGDFKAGVVLSQQGEAYQVELQSGKRSKVKSKDVLLQFTSPTPQQLLEEAQQI
AQAIELDFLWEVAGQEEFGFAELGAEYFGHAPLPAEAAGLLLSLHTAPIYFYKKGKGRYK
AAPEASLKAAQAGIEKKKQQALVQAEYVAQLKAGQLPEAMKPLALQLLFKPDKNSIEYKA
LEAACNELQTSPQRLMLTVGGIASPKQLHLSKFLLEFFPKGSGFPKIVIPAVADLPLAPV
QAFSIDDVTTTEIDDALSVQTLADGKVRVGIHIAAPGLGIKRGDALDAIARQRMSTVYMP
GDKITMLPDELVEAFTLAEGKNCPALSLYATLDPVDWSVVSTETKAELVPISANLRHNTL
DELVTEDNLANDAGEYPHKADIALLWKWIQVLEQGRMAKRESFGLRPEQNNRVDFNFYVE
DEVVTIARRKRGAPLDKIVAELMIFANSSWGKLMSDHGVPGIYRAQGGGSGGWAAKMQVR
MVTHAAPHQGLGVDQYAWSTSPLRRYTDLVNQWQILACVEGGVAAPLVAPFKPRDADLFA
IVSGFDAAYSGYGDFQSNMERYWCLRWLGQEQAQHGTRQVEAAVLKDEILRLAEIPLIIK
LPGMQQLARGTQVKLDILRWDEVELTVEARLLEVSAAPSAEAEQLEREDEEEISEELDAA
MDMPHETVDAPSEDAAGDAAAEPGSAIEEIKPLTE |
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| NT seq |
2088 nt +upstreamnt +downstreamnt
atgaatctattttttgaagagtccggcgactttaaagcaggtgttgtactgtcgcagcaa
ggcgaggcctatcaggtcgaactgcagtcgggcaaacgcagcaaggtcaaatccaaggat
gtgctgttgcaattcacctcaccgacgccgcaacagctgctggaagaagcgcagcagatc
gcgcaagcgatagagctcgatttcctgtgggaagtcgcgggccaggaagaattcggcttt
gccgagctgggcgcggaatatttcggccatgcgccgttgccggctgaagctgcgggtttg
ctgctgagcctgcatacggcgccgatctatttttataaaaagggcaagggccgctacaag
gcagcgccggaagcttcgttgaaggccgcccaggccggcatcgaaaagaaaaagcagcaa
gccttggtgcaagccgaatacgttgcgcagctgaaggccggacaactgccggaagcgatg
aagccgctggcgctgcagctgctgttcaagccggacaagaacagcatcgaatacaaggcg
ctggaagcggcatgcaacgaattgcagacatcgccgcagcgcctgatgctgacggtaggc
ggcatcgcctcgccgaagcagttgcatctctccaaattcctgctggaatttttccccaag
ggttcgggttttcccaagatcgtcattccagcggtagcggatttgccgctggcgccggtg
caggcattttccattgacgatgtcactactaccgaaatcgacgatgccttgtcggtgcag
acgctggcagacggcaaggtgcgggtcgggatccatatcgcggcgccgggcctgggcatc
aagcgcggcgatgcgctggatgcgatcgcgcgccagcgcatgtcgaccgtatatatgccg
ggcgacaagatcaccatgctgccggacgaactggtggaagccttcaccctggccgaaggc
aagaactgcccggcgctgtccctgtacgccaccctcgatcccgtcgactggagcgtggtc
agcaccgagaccaaggcggaactggtgccgatttcagccaacctgcgccacaacacgctg
gacgagctggtgaccgaggacaatctcgccaacgacgccggcgagtatccgcacaaggcc
gacatcgccttgttgtggaaatggatacaagtcctggagcagggccgcatggccaagcgc
gaaagcttcggcttgcggcctgaacagaacaaccgcgtcgatttcaacttctacgtggaa
gacgaggtagtcaccatcgcccgccgcaagcgcggtgcgccgctcgacaagatcgtggcg
gagctgatgatcttcgccaacagcagttggggcaagctgatgtccgaccatggcgtgccg
ggcatataccgggcgcagggcggcggcagcggcggctgggccgccaagatgcaggtgcgc
atggtgacccacgcggcgccccatcaggggctgggagtcgaccagtacgcctggagcacc
tcgcccttgcgccggtataccgacctggtcaaccagtggcagatcctggcttgcgtcgaa
ggcggggtcgctgcaccgctggtagcgccattcaagccgcgcgatgccgacttgttcgcc
atcgtgtccggcttcgacgccgcttattccggttacggcgacttccagtcgaacatggag
cgttactggtgcttgcgctggctgggccaggaacaggcgcagcatggaacgcgccaggtc
gaggcggcggtgctgaaggatgagatcctgcgcctggccgagatcccgctgatcatcaaa
ttgccaggcatgcaacagctggcgcgcggcacccaggtcaagctggacatcctgcgctgg
gatgaggtcgagctgacggtcgaggcgcgcttgctggaagtctctgcggcgcctagcgca
gaggccgagcagctggagcgggaggacgaagaggaaatttcggaagagctggatgcggca
atggacatgccgcatgagacggtggacgcgccatcggaggatgcggcgggcgatgcggcc
gccgagcctgggagcgccatcgaggagatcaagccgctaacggaatga |
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