Collimonas fungivorans: CFU_1042
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Entry
CFU_1042 CDS
T01583
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CFU_1042 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfu02000
]
CFU_1042 (msbA)
Enzymes [BR:
cfu01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
CFU_1042 (msbA)
Transporters [BR:
cfu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CFU_1042 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
ABC_ATPase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEK60874
UniProt:
G0AIU1
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All DBs
Position
1221952..1223709
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AA seq
585 aa
AA seq
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MSAFSYTTIFKRLALLHRPYKKRLTLGLLGMVVTAATEPLVAYIFKILLDNGFVQKPTFP
LWLVPIAVIGAFVARGASTFLTTYMTNWVSTRVLTTLRQQMFNRILNVSIDFHATHTVGR
VINSIMFEVQQIIEMISKLFTSIVRCVLTVAGLLGYMLFISWKLTIVALVLMPLMMLVVR
TTAKRLKKLNKDSLDVNAQLTQVIEETARAQQVIKVFGGETYERQRFAESAEHIRHYSMR
MTSTFAATVPVTQIMMACAMSAMITMGLVQASHGQLTAGDFVSFLAAMIALQVPLKQLAE
VNGPLQRGMAAAEAVFKLIDSPIERTGGIQLDKRANGKIEFSNVGFSYPGQEKPALKGIN
LSVKPGETIAFVGMSGGGKSTLVNLIPGFYSTTEGRILLDDLPIEDISLNSLRAQIAMVS
QNVVLFNDTIAANIAYGDSAPDRVRIEAAAKAAYLAEMIAALPDGYETQIGDNGSRLSGG
QRQRLAMARAIYKDAPILILDEATSALDTESERAVQAALDQLMQGRTTFVIAHRLSTIER
ASRIVVLSNGSIVEIGSHDELLSKRGAYANLYHLQFSKDAVNVEM
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcattctcctatacaaccattttcaagcgccttgcgctattgcatcggccatac
aaaaagagattgaccctgggtctgcttggaatggttgtgactgcggcaaccgagccgctg
gtggcttacatcttcaaaatcctgctggataacggttttgtgcaaaaacctacctttccg
ctgtggctggtgccgatagccgtgattggcgcattcgtcgcccgcggcgcctcgacattt
ttgacaacctacatgaccaactgggtgtctacccgcgtactgacgacattgcggcagcaa
atgttcaatcgcatcttgaacgtgtcgattgatttccacgccacccataccgtggggcgc
gtaatcaattcgatcatgttcgaggtacagcaaatcatagaaatgatcagcaagctgttt
acgtcgatcgtgcgttgcgtgctgacagttgccggtttgttgggctacatgctgttcatc
agctggaaattgacgattgtggccctggtgctgatgccgttgatgatgctggtggtgcgc
actaccgccaagcgcctgaaaaagctgaataaggattcgctcgacgtcaacgcccagttg
acccaggtaatcgaagaaaccgcgcgcgcccagcaggtcatcaaagtgtttggcggtgag
acttacgagaggcagcgcttcgcggaatcggccgaacatatacgtcattacagcatgcgc
atgaccagcacctttgccgccaccgtgccggtcacgcaaatcatgatggcttgtgcgatg
tcggcaatgatcacgatggggctggtgcaggcaagtcacggccagctgaccgcaggcgat
ttcgtgtcattcctggcggcgatgatcgccctgcaagtccctctcaaacagctggccgaa
gtgaacggcccgctgcagcgcggcatggccgcggcagaagcggtgtttaagctgatcgat
agtccgatcgaacgcaccggcggcatacagctggacaaacgcgcaaacgggaaaatcgaa
ttttccaacgtcggtttttcatatccgggccaggaaaagccagcgttaaaaggcatcaac
ctgagcgtcaagcctggtgaaaccatcgccttcgtgggcatgtcgggcggcggaaaatcg
accctggtgaacttgattcccggattttattcgacgactgagggccgcatcctgctggat
gacttgcctatcgaggacatatccttgaatagcctgcgggcccagatagccatggtcagc
cagaatgttgtgctgttcaacgatactatcgctgccaatatcgcctatggcgacagcgcg
ccagaccgggtacggattgaagccgccgccaaggccgcttatctggccgagatgatcgct
gctttgcctgacggttacgaaacgcagatcggcgacaacggttcacgcctgtccggcggc
cagcgccagcggctggcaatggcgcgcgctatctacaaggacgctcctatcctgatcctg
gatgaagcgacttcggcgctggacaccgagtcggaacgggcagtgcaggcagcgctcgat
cagctgatgcagggccgcaccaccttcgtgattgcgcacaggctctcgactatcgagcgc
gccagccgcattgtggtgctctcgaacggcagcattgttgaaatcggtagccacgatgaa
ttgctgagcaagcggggcgcatacgcaaatttatatcatctccagttttccaaggacgcg
gtgaatgtagagatgtaa
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