Collimonas fungivorans: CFU_1209
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Entry
CFU_1209 CDS
T01583
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00061
Fatty acid biosynthesis
cfu00071
Fatty acid degradation
cfu01100
Metabolic pathways
cfu01212
Fatty acid metabolism
cfu02024
Quorum sensing
cfu04146
Peroxisome
Module
cfu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CFU_1209
00071 Fatty acid degradation
CFU_1209
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CFU_1209
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFU_1209
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cfu01004
]
CFU_1209
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfu04147
]
CFU_1209
Enzymes [BR:
cfu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CFU_1209
Lipid biosynthesis proteins [BR:
cfu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CFU_1209
Exosome [BR:
cfu04147
]
Exosomal proteins
Exosomal proteins of breast milk
CFU_1209
Exosomal proteins of breast cancer cells
CFU_1209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEK61041
UniProt:
G0AJA7
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All DBs
Position
1419199..1420851
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AA seq
550 aa
AA seq
DB search
MDVQKNPVQMLLQWASQKPDMPWLFQPVDGQWRAITRGQGCDQVSRMAAALKAMDWEPGS
RICISGRNTAHWIMADLAIAMVGHVSVGLYPKQAAATTRYIFEHSEAKAVFLGPMPDADD
FMGAIPESVCTISFPYQETPAGRFKWDELVAANQPMTDYQAPPQEALMTLIYTSGTTGNP
KGVMLSYGNVLFAVYSIMDLAPSPTQERYFSYMPLAHAFERFAIAIPSCYNGGEVHFLEN
VDKMGEQLAQVAPTRFFGVPLVYSRIQNAILHKMPQRKLDRLMAIPLLRNIIRRKIRTAV
GLQNTRICLSGAAPIPVALLDWYRRNLGLEVLQGYAPTEASVYSSACLPGNNRSGSVGKP
PPNAGFRLSDEGEILFKHPGLMMGYYKDPESTSAAFTADGYLRTGDKGRVDQDGYLYITG
RVKDIFKTAKGKYVAPAPIECSLARNTDLENLLFIGSGMNQPVMAVTLTAAARSKPRAEV
EQQLIADMALVNATLEPHEKIAKCVVLKDAWSIDNGLMTPTMKVKRGEVEKRYAALMEKE
LQIRNAVGWE
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgcaaaagaatccggtgcaaatgctgttgcagtgggcgtcgcagaagcccgac
atgccttggctgttccagccggtcgatggccagtggcgagccatcacaagaggccagggc
tgcgaccaggtcagccgcatggcggcggcgctgaaggcgatggactgggaacccggcagc
cgcatctgcatctccggccgcaacaccgcgcactggatcatggccgacctggcgatcgcc
atggttgggcatgtcagcgtcggcctgtacccgaaacaggcggcggccaccacacgttat
atcttcgaacatagcgaggccaaggcggtgttcctcggccccatgccggacgccgacgat
ttcatgggggcgattccggaatcggtctgcaccatctcgtttccctaccaggaaacgccg
gcgggccggttcaagtgggacgaactggttgcggccaaccaaccgatgacggactaccag
gcgccgccgcaggaggcgctgatgaccctgatctacacttccggcaccaccggcaatccg
aagggggtgatgctcagttacggcaacgtattgttcgcggtgtacagcatcatggacctg
gcgccgtcgcctacccaggaacgctatttttcatacatgccgctggcgcacgcattcgag
cgctttgcgatcgccatccccagctgctacaacggcggcgaagtgcatttcctggaaaac
gtcgacaagatgggcgagcagctggcgcaggtggcgccgacccgtttttttggcgtgccg
ctggtttacagccggatacagaacgccatcctgcacaagatgccgcagcggaaactggac
cggctgatggcgattcccctgttgcggaacatcatccggcgcaagatccgcaccgccgtc
ggcttgcagaatacccgcatttgcctgtccggcgcggcgccgataccggtggcgttgctg
gactggtaccgccgcaacctggggctggaagtgctgcaaggttatgcgccgaccgaagcc
tcggtctattccagcgcttgcctgccgggcaataaccgcagcggttcggtcggcaagccg
ccgccgaatgcaggattcagattgtcggatgaaggcgaaatcctgttcaagcacccaggg
ctcatgatgggatactacaaagaccccgagagcaccagtgccgccttcactgcggatggc
tacctgcgcaccggcgataaaggcagggtggaccaggacggatacctgtatattaccggc
cgcgtcaaagacatctttaaaaccgccaaggggaaatatgtggcgcccgcgcctatcgaa
tgttcgctggcgcgcaataccgacctggagaacctgttgttcatcggcagcggcatgaac
cagccggtgatggcggtgaccctgaccgcagccgcgcgcagcaagccgcgggcagaagta
gagcagcagctgatcgccgacatggcgctggtcaatgcgacgctggagccgcatgaaaag
atcgccaaatgcgtggtgctgaaagacgcctggagcatagacaacggactgatgacgccg
accatgaaagtcaagcgcggcgaagtggaaaaacgttatgctgcgttgatggagaaggaa
ctgcagatacgcaacgcggtcggatgggaatga
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