Collimonas fungivorans: CFU_1211
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Entry
CFU_1211 CDS
T01583
Symbol
fadB2
Name
(GenBank) 3-hydroxybutyryl-CoA epimerase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00071
Fatty acid degradation
cfu00280
Valine, leucine and isoleucine degradation
cfu00310
Lysine degradation
cfu00362
Benzoate degradation
cfu00380
Tryptophan metabolism
cfu00410
beta-Alanine metabolism
cfu00640
Propanoate metabolism
cfu00650
Butanoate metabolism
cfu00907
Pinene, camphor and geraniol degradation
cfu00930
Caprolactam degradation
cfu01100
Metabolic pathways
cfu01110
Biosynthesis of secondary metabolites
cfu01120
Microbial metabolism in diverse environments
cfu01200
Carbon metabolism
cfu01212
Fatty acid metabolism
Module
cfu_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CFU_1211 (fadB2)
00650 Butanoate metabolism
CFU_1211 (fadB2)
09103 Lipid metabolism
00071 Fatty acid degradation
CFU_1211 (fadB2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CFU_1211 (fadB2)
00310 Lysine degradation
CFU_1211 (fadB2)
00380 Tryptophan metabolism
CFU_1211 (fadB2)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CFU_1211 (fadB2)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CFU_1211 (fadB2)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CFU_1211 (fadB2)
00930 Caprolactam degradation
CFU_1211 (fadB2)
Enzymes [BR:
cfu01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CFU_1211 (fadB2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CFU_1211 (fadB2)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CFU_1211 (fadB2)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
DAO
F420_oxidored
NAD_binding_2
AlaDh_PNT_C
NAD_binding_8
ApbA
RS_preATP-grasp-like
UDPG_MGDP_dh_N
2-Hacid_dh_C
GIDA
Motif
Other DBs
NCBI-ProteinID:
AEK61043
UniProt:
G0AJA9
LinkDB
All DBs
Position
complement(1421266..1423398)
Genome browser
AA seq
710 aa
AA seq
DB search
MSVNFQKDGDNIVTLTLDMPGRSMNVLNEALTAPFMEAIAAIEADPAIAGVIITSGKADF
VAGADIEKLFQITEAQTAFDLVQQFKGFLRRLELCGRPVVAALNGTALGGGLELALACHH
RIAINNPKAKFGLPEVKLGLLPGGGGTQRLPRMIGIQGALQLMLEGKELRAEEALQQGII
QELASDREDLLAKAKAWCLANPKAKQPWDDKKFRWPGGDSRSPGNGQLWAIAPSMASAKT
HGNYPAATNIMSCVFEGGIVDFDTGCEIESRYFVNCALSPVAKNMIGTLWFQLNAINKGK
SRPEGIAPSKVSKVGILGAGMMGAGIAYASAKAGIQVVLLDNSLETAENGKDYSSKLLDK
AIKRKQQTAEGKQALLDRIRPTVDFGDLASCDLIIEAVFEDREVKATVTRKTEALISADA
VFASNTSTLPITGLAQASVRPENFIGLHFFSPVDKMPLVEIIVGRQTSQQTLARGFDYVQ
QIKKTPIVVHDSRGFYTSRVFGTYVMEGLKLLMEGQHPRAIEMAGLQAGMPVGPLAVHDE
VSLSLSLHILQQTRKDFAEAGKPFAGHPADAGLEKMVTQLDRKGKKAGKGFYDYPENESK
HLWPGLQQAFPLAATQLPQKDLIERLMFVQANEAAKCYEEQVVLTVADANIGSIFGWGFA
PFQGGALQYINAYGVANFVRRANQLSEQFGSYFAPAAILVKMAEQGKHFE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaaattttcaaaaagacggcgacaatatcgtgaccctgaccctggacatgcca
ggacggtcgatgaatgtattgaacgaagcgctgaccgcgccgttcatggaggcgatcgcc
gccatcgaagccgacccggctatcgccggcgtcatcattacctcaggcaaggcggatttc
gtggccggcgccgatatcgaaaaactgttccagattactgaggcgcaaacagccttcgac
ctggtgcagcaattcaaaggtttcctgcgccgcctcgaactatgcggccggccggtggtg
gccgcgctgaacggcaccgcgctgggcggcggcctggagctggcgctggcctgccatcac
cgcatcgccatcaacaatccgaaagccaagttcggcctgccggaagtcaagctcggcctg
ctgccgggcggcggcggcacacaacgcctgccgcgcatgatcggcatccagggcgcgctg
cagctgatgttggaaggcaaggagctgcgcgccgaagaagcgctgcagcaaggcatcatc
caggaactggcgagcgacagggaagacttgctggccaaggccaaagcctggtgcctggcc
aatcccaaggccaagcagccgtgggacgacaagaaattccgctggcccggcggcgactcg
cgcagcccgggcaacggccagctgtgggcgattgcgccgtccatggcaagcgccaagacc
catggcaattatcctgcggcgaccaacatcatgagctgcgtattcgaaggcggcatcgtc
gatttcgataccggctgcgaaatcgaatcgcgctacttcgtcaactgcgccttgtcgccg
gtcgccaagaacatgatcggcaccttgtggttccagctgaacgccatcaacaagggcaag
tcgcgcccggaaggcatcgcgccatccaaggtcagcaaggtaggcatactcggcgccggc
atgatgggcgccggcatcgcctatgcctcggccaaggccggcatacaagtggtgttgctg
gacaacagcctggaaaccgccgaaaacggcaaggactattccagcaagctgctcgacaag
gcgatcaagcgcaagcagcaaaccgcggaaggcaagcaagccctgctggatcgcatcagg
ccgaccgtggatttcggcgacctggcaagctgcgacctgattatcgaggcggtgtttgaa
gaccgcgaggtcaaggcaacagtgacccgcaaaaccgaagcgctgatcagcgccgacgca
gtgtttgcctcgaacacctctaccctgccgatcaccggcctggcgcaggccagcgtacgg
ccggaaaatttcatcggcctgcatttcttctcgccggtggacaagatgccgctggtcgaa
atcatcgtcggccggcagaccagccagcaaaccctggcgcgcggtttcgactacgtgcag
cagatcaagaaaacaccgatcgtagtccacgattcacgcggcttctacacctcgcgcgta
ttcggcacctatgtgatggaaggcttgaaattgctgatggaaggccagcatccgcgcgcc
atcgagatggcgggcttgcaggccggcatgccggtggggccgctggcagtgcacgatgaa
gtcagcctgtccttgtcgctgcatatcctgcaacagacgcgcaaggatttcgccgaagcc
ggcaaacctttcgccggccatccggccgatgccgggctggaaaaaatggtgacccagctc
gaccgcaaaggcaaaaaagccggcaagggattttatgattatccagaaaacgaaagcaag
cacctgtggcccggcctgcagcaggccttcccgctcgcagccacgcagctgccgcaaaag
gacttgatcgaacgtttgatgtttgtgcaggccaacgaagccgcaaagtgttatgaggaa
caggtagtgctgaccgtcgccgacgccaatatcggcagcattttcggctggggattcgca
ccgttccagggcggcgccctgcaatacatcaacgcctacggcgtcgctaattttgtccgg
cgcgcgaaccagctatcagagcagttcggcagttatttcgcaccggccgcgatactggtg
aaaatggcggaacaaggcaaacacttcgaatag
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