Collimonas fungivorans: CFU_1278
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Entry
CFU_1278 CDS
T01583
Symbol
yapH
Name
(GenBank) outer membrane autotransporter barrel
KO
K19231
fibronectin-binding autotransporter adhesin
Organism
cfu
Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfu02000
]
CFU_1278 (yapH)
Transporters [BR:
cfu02000
]
Other transporters
Pores ion channels [TC:
1
]
CFU_1278 (yapH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Autotransporter
ESPR
Motif
Other DBs
NCBI-ProteinID:
AEK61110
UniProt:
G0AJH6
LinkDB
All DBs
Position
1492100..1498846
Genome browser
AA seq
2248 aa
AA seq
DB search
MRASFCLFFCIFPENVMSKTYRLVWSKTQGALVVTSELAKTNGKGASNLLLSTASIGAAG
GLSGQGETTPQLRRLPALLALATTGFFALNGSTAWANCTPANPADGATVTCAGAAPLLAP
SFSSAANNLTVNVNTGASAGVLLGLLGTAMNLTGNNVTLNNGGTIDPSLLGAASLLSTGT
VIGNAAASTVTVNNSGTMKGTSGLLGVSLTNLNGVALAVQNGTGGVSNLSNTGTIGSSPL
LGVSLFASDAPVVAAYGGGQVNFVNSGTINGRVAFEASGTPGTGNTFVNSGTITGSVSMG
VNSSNTFTAVTGSTVNSGGSLGLNLLNVVGLNLGFAATGTVDGGAGGNNTLLLQNTATGT
GSGSTGSGTITSGTYINFQHLGLNSGSWTLSGAQTFQDATLNGGLALFDNSASFGTGAIT
ANGGAIQATAGGLNLGNSFNLLGGGLTVQGASALTISGIISGVGGLTKNDSGTLSLNGAN
SYSGNTNLNAGGLILGNATAIGSGTLAVGGNATLDTSTALTLGNNINLAGGADLTLTGSN
NLGLSGIISGAGGLVKNGSTTTTLTGANTFTGGATINAGTLAIGAGGSLAPTVAVNVAGL
GAGFDISAGGNQTIGSLAGVAGSTVALGANTLTFGDATNQTYGGVIGGSGGLVKQGSGTE
TLTGANTFTGGATINAGTLAIGAGGSLAPTVAVNVAGAGAGLDISAGGNQTIGSLAGVAG
STVALGANTLTFGDATNQSFGGVIGGTGGLVKQGSGTETLTGANTFTGGATINAGTLAIG
AGGSLAPTVAVNVAAAGAGFDISAGGNQTIGSLAGVAGSTVGLGANTLTFGDATNQTFGG
VIGGTGGLIKQGAGTETLTGANTFSGGATINAGKLAIGAGGSLAPTVAVNIAGVGAGLDI
SAGGNQTIGSLAGVAGSTVALGANTLTFGDATNQTFGGVIGGTGGLIKQGAGTETLTGAN
TFTGGATINAGTLALGAGGSLLPTVAVNVAGAGAGFDISAGGNQTIGSLAGVAGSTVGLG
ANTLTFGDATNQTFGGVIGGTGGLIKQGAGTETLTGANTFTGGATINAGTLALGAGGSLG
PTVAVNVAAAGAGLDISAGGNQTIGSLAGVTGSTVALGGNTLTFGDATSQTFGGVIGGTG
GLVKQGTGTETLTAANTFTGGATINAGTLALGAGGSLAPTVAVNVAGAGAGLDISAGGNQ
TIGSLAGVTGSTVALGGNTLTFGDATNQTFGGVIGGTGGLVKQGTGTETLTAANTFTGGA
TINAGTLALGAGGSLAPSVAVNVAGAGAGLDISAGGNQTIGSLAGVTGSTVALGANILTF
GDATNQTFGGVIGGTGGLVKQGTGTETLTGANTFTGGATINAGTLAIGAGGSLAPTVAVN
VAGAGAGLDISAGGNQTIGSLAGVAGSTVALGANTLTFGDATNQTFGGVIGGTGGLVKQG
TGAETLTGANTYTGGTTINAGSLILGNSSAIGTGALTVGGAATIDNTIPLTLNNAVVLNA
GLTVAGSNDLTLSNVVSGTGSLTKDGAANLTLAGANTYSGGTVLNNGTITVGNNSALGTG
SLALNAGQLDVNGFQITVAGLSGNGNVTLGGNSGSVTVNGGGTYGGVISGAGTVAKGGSD
TLTLTGANTYTGGTTINAGTLQIGNGGTTGSIVGNVVDNGTLAFNRSDDITYGGVISGTG
SVVKLGAGVLDLSGVSTYSGPTAVNAGTLAVSGSIANSTVTVNNGGTIQGPGTIGGLLVN
SGGTAAIAAAGKPIGSLTVAGNAAFTPGSFYQVKATPQQSDLIKVGGSTSLTGGTVQVMA
AIGDYKPTNNYTILTAAGGVNGTFSGVTSNLVFLTPSLSYDAKNVFLQLVRNSVSFQQAA
TTPNQQSVANAVTILGGGNTIYDTITSLDLASAQAAFDSLSGEIQASARSVMLEDSRYIR
DAVTARARQGSAARSGVLSALSSGGAASCTADSATQQNDPLRADNACADDRRNARVVWGQ
VYGAKSNLDGENGVANVNRSTGGFIVGVDTPLNDTWRAGVAGGIGHTSFDTSRSNGSGSI
DSYHLALYGDAQFGALGVRLGTAYTWNKLDTDRSIVFPGFSDSTKSSYDAHTTQVFGELG
YAIAAGRVALEPFAGLAYVNLHTDGFSENGGAAALSGKSDSQNVTFSTLGVRAATLLGAP
GSGVTARGTVGWRHAFGSVTPTADLAFKSNAAASFAVTGVPVARDAMLVEAGIDVGIGKS
ATLGLGYSGQFGDKVRDNAIKANIAWKF
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
ttgagggcgtctttttgcctatttttttgtatttttccggagaacgtcatgagcaagact
tatcgtttggtatggagcaagacacaaggtgcgctggtagtcacatcggaactggccaag
accaatggcaagggagcctcgaacctgctgttgtcgacggcctcgatcggcgcagccggc
ggcctgtccggccagggcgaaaccacgccgcagctgcggcgcctgccggcattgctcgca
ctggcgacaaccggcttttttgccctgaacggttcgacagcctgggccaattgcacgccg
gccaatccggctgacggcgcgacagtcacctgcgccggcgctgctccgctactggcgcct
tcattcagcagcgccgccaataacctgacggtgaacgtgaacaccggcgccagcgccggc
gtgctgctgggcctgctcgggacggcaatgaatttgaccggcaacaatgtcacgctcaat
aacggcggcaccatagatccgtcgctgctgggggcggccagcctgctatcgaccggcacc
gtgatcggcaatgccgcggccagcaccgttaccgtcaacaacagcggcaccatgaagggc
accagcggcttgctaggggtgagcctgaccaacctgaacggtgtcgcgctggcggtgcag
aacggcaccggcggcgtcagcaatctgtccaataccggcaccatcggcagttcgcctttg
ctgggcgtctcgctgttcgcatccgatgcgccggtggttgcagcctacggcggcggccag
gtcaactttgtcaattccggcaccatcaacggccgggttgcgttcgaggcttcgggtacg
cccggcaccggcaacaccttcgtcaattccgggaccatcaccggcagcgtatcgatgggc
gtcaacagcagcaacacctttaccgcggtgaccggctctactgtgaattcaggcggcagc
cttggcctcaacctgttgaacgtagtcggcctcaacctcgggtttgccgcaaccgggacg
gtcgacggcggcgccggcggcaacaataccttgctcctgcaaaacacggcaaccggcacc
ggcagcggcagcaccggttccggcaccattaccagcggcacctacatcaacttccagcac
ctgggactcaacagcggcagctggaccttgagcggagcgcagacattccaggatgcgacg
ctgaacggcggcctggcattgttcgacaattccgcctctttcggcaccggtgcaattacg
gccaacggcggcgcgatccaggccactgccggcggcctcaatcttggcaacagcttcaac
ctgctaggcggcgggctgacggtccagggcgcgagcgcactgaccatatcgggcatcatc
tcgggcgtcggcggattgaccaagaacgacagcggcacgctgtccttgaacggcgccaat
agctatagcggcaataccaatctcaacgctggcggactcatcctggggaacgcgactgct
atcggcagcggtaccctggcagtggggggcaacgcaacactggataccagcacagcactg
acgctgggcaacaacatcaatctcgccggcggagcggacctgaccctcaccggcagcaat
aacctcggcctgagcggcatcatttccggcgccggcggcctcgtgaaaaacggcagcacc
actaccacgctgaccggcgccaacaccttcaccggcggcgcgacgatcaacgccgggacg
ctggccatcggcgcaggcggcagcctggcgccgaccgtggcggtcaacgtggccggcctc
ggcgccggtttcgacatttctgcgggtggcaaccagaccatcggttcgctggctggcgtg
gcaggcagcacggtagccctgggcgccaataccttgactttcggcgacgccaccaaccag
acctatggcggtgtcatcggcggcagcggcggcctggtcaaacaaggcagcggcaccgaa
accctgactggcgccaataccttcactggcggcgcgacgatcaacgccggtacgttggcc
attggcgcaggcggcagcctggcgccgaccgtggcagtcaacgttgcgggcgctggcgcc
ggcctggacatttctgcaggcggcaaccagaccattggttcgctggccggcgtggcaggc
agcacagtcgcactgggtgcaaataccttgacctttggcgacgccaccaaccagtccttc
ggcggcgtcatcggcggcactggcggcctggtcaaacaaggcagcggcaccgaaaccctg
accggcgccaataccttcactggcggtgcgacaatcaatgccggtacgctggctattggt
gcaggcggcagcctggcgccaaccgtggcggtcaacgtcgccgcggctggcgccggtttc
gacatttctgcaggcggcaaccagaccatcggctcattggctggcgtagcgggcagcaca
gtaggtttgggcgccaataccctgacctttggcgacgccaccaaccagaccttcggcggc
gtcatcggcggcaccggtggtttgatcaaacaaggcgcgggtacggaaaccctgacaggc
gccaatacatttagcggcggcgcaaccatcaatgccggcaagctggccatcggcgcaggc
ggcagcctggcgccaaccgtggcagtcaacattgccggcgtaggcgccggcctggatatt
tctgcgggcggcaatcagaccatcggttcgctggccggcgtggcaggcagcacagtagcc
ttgggagcgaataccttaacctttggcgacgccactaaccaaaccttcggcggcgtcatc
ggcggcaccggtggtttgatcaaacaaggcgcgggcaccgaaaccctgacaggcgccaac
accttcaccggcggcgcaacgatcaatgccggcacgctggccctcggtgcaggcggcagc
ttgctgccgaccgtggcggtcaacgtcgctggcgccggcgccggttttgatatttctgcc
ggcggcaaccagaccatcggctcattggctggcgtagcgggcagcacagtaggtttgggc
gccaataccctgaccttcggcgacgccaccaaccaaaccttcggcggcgtcatcggcggt
actggtggtttgatcaaacaaggcgcgggcaccgaaaccctgacgggcgccaacaccttt
actggcggcgcaaccatcaatgcagggacgttggcactgggcgcaggcggcagcctgggg
ccgaccgtggcagtcaacgtcgccgcagctggcgctggcctggatatttccgcgggcggc
aaccagaccatcggttcgctagccggtgtgacaggcagcacggtagctttaggcggcaac
accttgaccttcggcgatgccaccagccagacttttggcggagtcatcggcggcaccggt
ggcctggtcaagcagggcacaggcactgaaaccctgaccgctgccaataccttcactggc
ggcgcgacgatcaacgccggcacgctggcgcttggcgcaggcggcagcctggcgccgacc
gtggcagtcaacgttgcgggcgccggcgccggcctggatatttccgccggcggcaaccag
accatcggttcgctggccggtgtgacaggcagcacggtagctttgggcggcaacaccttg
accttcggcgatgccaccaaccagacctttggcggggtcatcggcggcacaggcggtttg
gttaagcagggtaccggcactgaaaccctgaccgctgccaataccttcactggcggcgcc
acgatcaatgccggcacgctggcgcttggcgcaggcggcagcctggcgccgagcgtggca
gtcaacgttgcgggcgctggcgccggcctggatatttccgccggcggcaaccagaccatc
ggttcgctggctggcgtgacaggcagcacagtcgcactgggcgcaaatatcttaaccttt
ggcgacgccaccaaccagaccttcggcggcgtcatcggcggcaccggcggcttggtcaag
caaggcaccggcaccgaaaccctgaccggcgccaataccttcactggcggcgccacgatc
aacgccggtacgctggctatcggcgcaggcggcagcctggcgccgaccgtggcggtcaac
gttgccggcgccggcgccggcctggacatttccgccggcggcaaccagaccatcggttcg
ctggccggcgtagcaggcagcacagtcgcactgggcgccaataccttgaccttcggcgac
gccaccaaccagaccttcggcggcgtcatcggcggcaccggcggcctggtcaagcagggc
acgggcgccgagacactgaccggcgccaatacctacaccggaggcacgaccatcaacgcc
ggttcgctgatacttggcaacagctcagcgatcggcaccggcgcactgactgtcggcggc
gccgcaaccatcgacaacaccattccgctgacgttgaataatgcggtagtcctgaatgcc
ggcctgaccgtggcgggcagcaacgacctgacattgagcaacgtggtgtccggaaccggc
agcctgaccaaggatggcgctgccaacctgaccctggccggcgccaatacctatagcggc
ggcacggtcctgaacaacggcacgatcaccgtcggcaataattctgcgcttggcaccggc
agcctggctctgaatgccggccagctcgatgtgaacggcttccagataacggtggccggc
ttgagcggcaacggtaatgtgaccctaggcggcaacagcggtagcgtgacggtgaacggc
ggcggcacgtacggtggcgttatttcgggcgccgggacggtggccaagggcggcagcgat
accttgacgctgaccggcgccaatacctacaccggcggcactaccatcaatgccggtaca
ttgcagatcgggaatggcggcaccacaggaagcattgtaggcaacgtggtcgataacggc
acactggctttcaatcgctccgacgatatcacttatggtggcgtgatcagcggcaccggc
agcgtggtcaagctgggcgccggggtgttggatttgagcggcgtcagtacttacagcgga
ccgaccgcggtaaatgcaggtaccctggcggtaagcggttcgatcgccaattcgactgtc
accgtcaacaacggcggcaccatccagggccccgggactatcggcggattgctggtcaac
agcggcgggacggcagcgattgccgccgccggcaagcctatcggcagcctgacggtggcc
ggcaacgccgcctttacgcctggatcgttttatcaggtgaaggcgacgccgcagcaaagc
gacttgatcaaggtcggcggcagcaccagcttgactggcggaacggtgcaagtgatggcg
gcgatcggcgactacaagccgaccaacaactatacgatccttactgctgccggcggcgtc
aacggtacattttcaggggtgacgtcgaacctggtattcctgacgcctagcctgagctac
gacgccaagaacgtattcctgcaactagtgcgtaacagtgtgtcgttccagcaggcggcc
actacgccgaaccagcaaagcgtggctaacgctgtcaccatcctcggcggcggcaacacg
atttacgacaccatcacctcgctcgacctggcctcggcgcaagcggcgtttgacagtctg
tccggcgagattcaggccagcgcgcgcagcgtcatgctggaagacagccgttacatcagg
gatgccgtcacggcgcgcgcgcgccaggggtcggccgcgcgttccggggtcttgtcggcg
ctctcgagcggcggtgcagccagctgtacagcggatagcgcaacccagcagaacgatccg
ttgcgtgccgataacgcctgcgccgacgaccgccgcaatgcgcgggtggtctggggccag
gtatatggcgccaagagcaacctggatggcgagaacggcgtggccaacgtgaaccgcagc
accggcggcttcattgtcggggtcgacacgccgctgaacgatacctggcgtgcaggtgtc
gccggcggcatcggccacacatcgttcgacaccagccgctccaacggctccggttccatc
gacagctatcacctggcgctatacggcgacgcgcagttcggcgcgcttggcgtgcgcctg
gggaccgcatatacctggaacaagctggacaccgaccgcagcatcgtgttcccgggtttc
tccgacagcaccaagtccagctacgatgcccacaccacccaggttttcggtgagcttggc
tacgccatcgcggcgggccgggtagcgctggaaccgttcgccggcctggcgtatgtcaac
ctgcataccgacggcttcagcgaaaacggcggcgccgctgccctgagcggcaagagcgac
agccagaacgtcaccttctcgacattgggcgtaagggcagcaaccctcctgggtgctcct
ggctcaggcgtgacggcccgcggcacggtcggctggcgccacgcattcggtagtgtgacg
ccgactgcggacctggcgttcaagagcaacgccgctgcctcattcgcggtgaccggcgtg
ccggtagcgcgcgacgccatgctggtggaagccgggattgacgtcggcatcggcaagagc
gcaacgctgggcctgggatattcaggacagttcggcgacaaggtaagggacaacgccatc
aaggcaaacatcgcctggaaattctga
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integrated database retrieval system
