Collimonas fungivorans: CFU_1416
Help
Entry
CFU_1416 CDS
T01583
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
cfu
Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfu03009
]
CFU_1416
Ribosome biogenesis [BR:
cfu03009
]
Prokaryotic type
ribosomal protein modification factors
CFU_1416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
AEK61248
UniProt:
G0AJN3
LinkDB
All DBs
Position
complement(1670066..1672288)
Genome browser
AA seq
740 aa
AA seq
DB search
MEIKVNFLDKLRLEAKFDDFTVVSDQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCV
TRNIPTENIRLSQNNIVDPENRYQQIFKIQVELPADISAKDRQGILRSIERCTVKKVVQA
GPEFVIEEVANLDADAQALLTLKPASDASTYIVGKDLPLEQTIANMSGVLAALGIKIEIA
SWRNLVPNVWSLHIRDAHSPMCFTNGKGATKESALASALGEYIERLNCNHFYAGAFWGED
IANAEFVHYPNERWFKPGRKDALPAEILDEYCLQIYNPDGDLFGSHLVDTNSGNVQRGIC
SLPYVRQSDGEVVYFPSNLVENLYVSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEI
TLPDVPQEVLAKYPGILAGIQGLEEQGFPVLVKDASLGGVYPVMCVTLMNPRTGGVFASF
GAHPSLEVALERSLTELLQGRSFEGLNELPRPTFASEAVTEPNNFVEHFIDSSGIVSWRF
FSAKADFDFVEWDFSSQGQKDSSNAEEAATLFGILEDMGKQVYMAAYDNLGAIACRILVP
GYSEIYPIEDLVWDNTNKALLFRVDILNLHRLDDASLEALLERLDNNELDEYSDIATLIG
IEFDENTDWGQLTVLELKLLIHLALQQFDEAQEQVEAFLQYNDNSAERGLFYQALNVVLE
VQLDDELELDDYAVNFRRMFGNARMDAVMGSVDGSVRFFGLTPTSMKLEGLDRHQRLIDS
YKKLHRARASVAELHGTIAK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaattttctcgacaagctgcgtcttgaagccaagttcgatgacttc
acggtagtgtccgaccagcctatccgttacaagggcgatggttctgcgcctggtcccttc
gattattttctggcttcgtcggccttgtgtgcagcttattttgtgaagctgtattgtgta
actcgcaatattcctaccgaaaacatccgcctgtcgcagaataatatcgttgatccggaa
aaccgctaccagcagattttcaagattcaggttgagttgccggcggatatctccgccaaa
gaccgccaaggaattttgcgctccatcgagcgctgtacggtgaaaaaggtggtgcaggcc
gggcccgaatttgtcattgaagaggtcgcgaacctggatgccgatgcgcaggcgttgctg
acgttgaagccggcttctgacgccagcacctatattgtcggcaaggatctgccgctggaa
caaaccatcgccaacatgtcgggcgttctggcggccttgggcatcaagattgaaatcgct
tcgtggcgcaatcttgttcccaatgtgtggtcgctgcatatccgcgatgcacactcgccg
atgtgttttaccaacggcaagggagcgaccaaggaaagcgcgctggcgtcggcgttggga
gagtatatcgagcggctcaattgcaaccatttctacgccggcgcgttttggggcgaagac
atcgccaacgcggagtttgtacattacccgaacgagcgctggttcaagcctggccgtaaa
gatgcgctgccggctgaaattctggatgagtactgtctgcaaatttacaatcccgacggc
gatttattcggctcgcacctggtcgacaccaactccggcaatgtacagcgcggcatctgt
tcgctgccgtatgtgcggcagtcggacggcgaggtggtgtacttcccgtccaacctggtc
gaaaacctgtacgtcagcaatggcatgagtgccggcaacacgctggccgaagcacaggtg
caatgcctgtcggagattttcgaacgggcggtaaaacgcgaaatcctggaaggtgaaatc
acactgccagatgtgccgcaggaagtgctggcgaaataccctggcattctggccggcatt
cagggcttggaagagcagggttttccggtgctggtgaaagatgcctcgctgggcggggtg
tacccggtgatgtgcgtcaccttgatgaacccgcgcaccggcggcgtgtttgcctcgttc
ggcgcgcatccaagcctggaggtggcgctggagcgcagcctgacggaattgctgcagggg
cgcagttttgaaggcctcaacgaattgcctcggcccacctttgccagcgaagccgtgaca
gagccaaacaactttgtcgaacacttcatcgattccagcggcattgtgtcatggcgtttt
ttcagcgccaaagcggatttcgattttgtggaatgggatttttccagccagggtcagaaa
gacagctccaatgccgaggaagccgcgaccttgttcggtattctcgaagacatgggcaaa
caggtgtatatggcggcgtatgacaatttaggcgccatagcctgccggattctggtgccc
ggttattcggaaatttacccgatagaagatctggtctgggataacaccaacaaggcgctg
ctgttccgcgtcgatatcttgaatctgcatcgcctggacgatgccagcctggaagcgctg
cttgagcgtctggataacaatgagctcgatgaatattccgacatcgcgacattgatcggt
atcgaatttgacgagaatacggactgggggcaactgacggttctcgagctgaagctgctg
attcatctcgccttgcagcaatttgacgaggcgcaagagcaggtggaagccttcctgcaa
tacaacgacaactcggccgagcgcggattgttttatcaggccttgaatgtggtgctggag
gtgcagctggatgacgagctggaactggacgattacgcggtcaatttccgccggatgttt
ggcaacgcccggatggatgcggtaatggggtcggtggacggcagcgtgcgcttcttcggg
ctgacgccaacgagtatgaaactggagggtctcgacaggcaccagcgcctgatcgacagc
tacaaaaaattgcatagggctcgggccagtgtggccgagttacacggtacaattgccaaa
taa
DBGET
integrated database retrieval system
