Collimonas fungivorans: CFU_1636
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Entry
CFU_1636 CDS
T01583
Symbol
gcvA
Name
(GenBank) Glycine cleavage system transcriptional activator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
cfu
Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfu03000
]
CFU_1636 (gcvA)
Transcription factors [BR:
cfu03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CFU_1636 (gcvA)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AEK61468
UniProt:
G0A8J5
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All DBs
Position
complement(1921267..1922145)
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AA seq
292 aa
AA seq
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MDNQITRRLPPLAALKAFEAAARHLSIKSAAVELSVTPTAVSHQIRRLEESLGVAVFQRL
PRQLRLTAAGSELYVALREGFDLFAAAINRIQVRDAARMLTISTTPAFAARWLLPRLGAF
RSAYPKQDLRIHTSVEIAPLDGHTADIAIRYGLGLWPGLVAEKLFDDRIAPVSSPLLKVK
KPRDLLKHTLIHCEWQSTLRKASTWRAWAQRARFSGLDSRGGIVFSDESHAISAAIAGQG
VALLSTALIEPELKSGVLEQPFGPVLSNYAFYLVYPEARRADVHDVRAWISA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggataaccagatcacgcgccgcctgccgccgctcgccgccctgaaagcattcgaggct
gcggcgcggcacctgagcatcaagtccgccgcggtggaactctcagtgacgccgactgcg
gtgagccaccagatcaggcggctcgaagaaagcctcggggtggccgtattccagcgcctg
cccaggcaattgcgcctgacggcggccggctccgagttgtatgtggcgctgcgcgaaggc
ttcgatttgtttgcggctgccatcaaccgtatccaagtgcgcgacgcagcgcgcatgctc
accatttccaccacgccggcgtttgccgcacgctggctgctgccgcggctgggcgctttc
cggagcgcttatccgaagcaggacctgcgcatccatacttcggtggaaatcgcgccgctg
gacggccataccgcggatatcgcgattcgctacggactcggattgtggccgggactggtg
gcggaaaaactgttcgacgaccgcattgcgccggtaagcagccctttgctcaaagtgaag
aaaccgagggacctgctcaagcacaccctgatccattgcgaatggcagagcacgctgcgc
aaggcctcgacctggcgcgcctgggcccagcgcgccaggttcagcggcctggacagccgc
ggcggcatcgtattttcggacgaaagccacgccatctcggcggcgatcgccggacaaggc
gttgctctgctcagcactgccctgatcgagcccgaattaaaaagcggcgtgctggagcag
cctttcggtccggtgctcagcaactacgccttctatctggtgtatccggaagccaggcgc
gccgacgtgcacgacgtccgtgcctggatcagcgcgtaa
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