Collimonas fungivorans: CFU_1828
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Entry
CFU_1828 CDS
T01583
Symbol
hlyB
Name
(GenBank) putative ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
cfu
Collimonas fungivorans
Pathway
cfu02010
ABC transporters
cfu03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CFU_1828 (hlyB)
03070 Bacterial secretion system
CFU_1828 (hlyB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cfu02000
]
CFU_1828 (hlyB)
02044 Secretion system [BR:
cfu02044
]
CFU_1828 (hlyB)
Transporters [BR:
cfu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CFU_1828 (hlyB)
Secretion system [BR:
cfu02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CFU_1828 (hlyB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_29
RsgA_GTPase
AAA_16
DEAD
AAA_18
AAA_30
AAA_14
APS_kinase
SbcC_Walker_B
Cytidylate_kin
AAA_28
TXNDC16_3rd
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AEK61660
UniProt:
G0AGP7
LinkDB
All DBs
Position
2158549..2160789
Genome browser
AA seq
746 aa
AA seq
DB search
MFFIKIMRRRILKLVNLGLVSGRKQPASTHAFSVHDVIWAMGSFCGLNGKPFDSNLLLQQ
FPPPYGADSIVHAGRALGFKIKRKDCDSKALAVLHLPCLVIMNGQEVDNQLSNASAKAAN
DVDIEPAPRTSRPAIIVQINDGNVVLFEAGSNTPKTLTQDEFAASYAGTVFQLALNAKII
KDPDGAQAAQSKFGFNWFIPELLKHRRVWRDVLIASLIIQLLALGTPLFTQVVIDKVVVH
RTESTLIVIAIGLGVFMLFSALLSWVRQYLVLHTGNRVDAVLGSAVFDHLFKLPTRYFEH
RPTGVIAARLHGVESIREFVASAAVSLILDLPFLLIFVGIMFYYNVTLTLVALSLIGAIV
VLSLIMAPVFRDRLNHQFLLGARNQAFITEYVSGLETVKSLQMEPQLSARYGDYLADYLQ
AGFRMKQIANTYNVVANGIEQFMSLMILVVGAYTVMHNSDFTIGMLIAFQMFAGRVSQPM
LRIVGLWQQFQTANMSVQRLGDIMNAPKEPYSILPSRLRESKGSIEIDNLSFRYGENLPY
LYQNFGLKVSPGKVIAIMGPSGSGKSTLTKLLQGFYVPSDGQIKLDGNDIRYLSANELRH
YFGVVPQETVLFSGTIYDNLLMANPHATFDQVVHACRMAEIHDTIERLPQAYQTEIGERG
VGLSGGQKQRMAIARALLKQPKILVFDEATSSLDSATAEHFAGTINQLKGKVTMLFITHA
LPRNLLVDEVVRIGGGLIQAPLERVS
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
gtgttttttataaaaataatgcgccgtcgaatattaaaactggtcaacctaggtcttgtc
tcagggcgaaaacaacctgcttcgactcatgcgttttccgttcatgatgtgatctgggcg
atggggagtttttgtgggttgaacggaaaaccgtttgacagcaatctgctgctacagcaa
tttccacccccctacggtgccgactcgattgttcatgccggacgtgctttaggcttcaag
atcaagcgcaaggactgcgatagcaaggcgttagctgtattgcatctaccatgtctggtc
atcatgaatggccaggaggtcgacaatcagctctccaatgcctcggcaaaagcggctaac
gatgtcgatatcgaaccagcgccaagaacaagccgccctgcaatcatcgttcaaatcaat
gatggcaacgtcgtcttgttcgaagccggaagcaatacgcccaagaccttgacccaggac
gaattcgcggcttcctatgctggaaccgtgttccaactcgcgctgaatgccaaaataatc
aaggatccagacggtgcgcaagccgcccagagcaaattcggtttcaactggtttatcccc
gaacttctcaagcaccggcgcgtatggcgcgacgtgctgattgcttcgctgattattcag
ttactggcgcttggtacgccactatttacgcaagtcgttatcgataaagtagtagtgcat
cgcacagaaagcacgctgattgtcatcgccatcggcctgggtgtcttcatgctgttctcg
gcgctgttgtcgtgggtgcgccagtatctggttctgcacaccggaaaccgggtcgacgcc
gtcctgggcagtgcggttttcgatcatcttttcaagctgccgacacgctatttcgaacat
cgcccgaccggcgtcatcgctgcacgcttgcatggggtggaaagcattcgtgaatttgtc
gccagtgccgccgtgtcgttgattcttgatttaccgttcttgctgatcttcgtcggcatc
atgttctattacaacgtcaccttgaccctggttgccttgtcgctgatcggcgccatcgtc
gtgcttagtttaatcatggcgccagtgttccgcgatcgcctcaatcatcaatttttgctg
ggtgcgcgtaaccaggcattcattaccgaatatgtgtctggcctggaaaccgtcaagagc
ttgcagatggagccgcaactctcagcacgctacggcgactatctggccgactacctgcag
gcgggtttcaggatgaagcagatcgccaatacttataacgtggtagccaacggcatcgaa
caattcatgtcgttgatgatcctggtagtcggcgcgtataccgtgatgcataacagcgat
ttcacgatcggtatgctgatcgccttccagatgtttgccggcagagtctcgcaaccgatg
ctgcgcatcgtcggtttgtggcagcagtttcaaacggcgaatatgtcggtgcagcgcctg
ggcgacatcatgaatgcgccgaaagaaccgtattcgatcctgcctagtcgcctgcgtgag
agcaaggggagcattgaaatcgacaatctgagttttcggtacggcgaaaatttgccgtat
ctgtatcagaattttggcttaaaggtcagccccggcaaagtgattgcgatcatggggcct
tccggttccggtaagagcacgctgaccaagctattacaaggtttttatgttccatcagac
ggccagatcaaattagacggcaacgatatccgctatctctccgcgaatgaattacgccat
tacttcggcgttgtgccgcaggagaccgtcctgttctccggcactatctacgacaacctg
ttgatggcgaatccgcatgcaaccttcgaccaggttgtccatgcctgccgcatggcggaa
attcacgacactattgagcgtcttccacaggcctaccaaaccgagatcggcgagcgtggc
gtcgggctatccggtggccaaaaacagcggatggcgattgccagagccttgctgaaacag
ccgaagattctggtattcgatgaagctaccagcagtctcgattcagcgaccgccgaacat
tttgcggggacgatcaatcaattgaagggaaaggtaacgatgctgtttattacccatgca
ttgccgaggaatttattggtagatgaagtagtgaggattggtggcgggttgatacaggcg
cccttggagcgagtgtcatga
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