Collimonas fungivorans: CFU_1871
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Entry
CFU_1871 CDS
T01583
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cfu
Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfu03016
]
CFU_1871 (truA)
Enzymes [BR:
cfu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CFU_1871 (truA)
Transfer RNA biogenesis [BR:
cfu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFU_1871 (truA)
Prokaryotic type
CFU_1871 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AEK61703
UniProt:
G0AK18
LinkDB
All DBs
Position
2214095..2214937
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AA seq
280 aa
AA seq
DB search
MLFLRLEPGLNPNLNRIVLGVQYDGTPWQGWQTQPSGKTVQDRLEAALQKFAQGAIDTTC
AGRTDSGVHALEQVVHFDTALSRETFSWVRGLNAFLPPSIAVRWAHQLPLLAEGEDQFHA
RFSATARTYHYLLYNNPVRSPLLEGKAGWVFRPLELELMRQAAAHLVGTHDFSAFRAVEC
QAKSPVRTMEEIRIERRGDLIVFSLRANAFLHHMVRNIVGSLIYAGNASKPPEWLAELLA
QRDRGRAAPTFMPDGLYLAQVAYDPKWRLPQQPAGVLPWL
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ttgctttttttgagattggaaccgggtttgaatccgaatttgaatcgtattgttctcggt
gtgcaatacgacggcacaccttggcaaggatggcagacccagcctagcggcaagaccgtg
caggacaggctggaagccgccttgcagaaattcgcgcagggcgccatcgacaccacgtgc
gccggccgtaccgattccggcgtgcatgcgctggagcaggtggtgcatttcgatactgcc
ttgtcgcgcgaaacattctcctgggtgcgcggcctgaacgctttcctgccgccgtcgatc
gctgtgcgctgggcgcatcagctgcctctgcttgccgaaggtgaagatcaattccacgcg
cgcttcagcgccaccgcccggacctatcactacctcttgtacaacaacccggtccgttcg
ccgctgctggaaggcaaggccggctgggtgttccggccgctggagctggagctgatgcgc
caggccgcggcgcacctggtcggcacccacgatttttcggccttccgcgcggtggaatgc
caggccaagtcgccggtacgcaccatggaagagatccgcatcgagcggcgcggcgacctg
atcgtgttcagcttgcgcgccaacgctttcctgcatcatatggtgcgcaatatcgtcggt
tccctgatctatgccggcaacgccagcaagccgccggaatggctcgccgaattgctggcc
cagcgcgaccgcggccgcgcggcgccgactttcatgccggacggcctgtacctggcgcaa
gtggcttatgatccgaagtggcgcttgccgcagcagccggctggggttttgccctggctg
tag
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