Collimonas fungivorans: CFU_1920
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Entry
CFU_1920 CDS
T01583
Symbol
hfq
Name
(GenBank) RNA-binding protein
KO
K03666
host factor-I protein
Organism
cfu
Collimonas fungivorans
Pathway
cfu02024
Quorum sensing
cfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFU_1920 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFU_1920 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfu03019
]
CFU_1920 (hfq)
03036 Chromosome and associated proteins [BR:
cfu03036
]
CFU_1920 (hfq)
Messenger RNA biogenesis [BR:
cfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CFU_1920 (hfq)
Chromosome and associated proteins [BR:
cfu03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CFU_1920 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
SRP14
Motif
Other DBs
NCBI-ProteinID:
AEK61752
UniProt:
G0AK67
LinkDB
All DBs
Position
2261829..2262065
Genome browser
AA seq
78 aa
AA seq
DB search
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGHIESFDQYVVLLRNTVTQMVYKHTI
STVVPARAVNLNLESEAE
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataaagggcaattgttacaagacccgtttttgaacgccttgcgtaaagagcat
gttccggtgtctatctatctggtcaacggcatcaagcttcaaggccatatcgaatccttc
gatcaatacgtcgttttactgcgtaataccgttacccaaatggtatacaaacacaccatc
tcaaccgtagttcctgcacgcgctgtcaatctgaatcttgaatctgaagcagaataa
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