KEGG   Collimonas fungivorans: CFU_1973
Entry
CFU_1973          CDS       T01583                                 
Symbol
ligD
Name
(GenBank) Ku domain protein
  KO
K10979  DNA end-binding protein Ku
Organism
cfu  Collimonas fungivorans
Pathway
cfu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cfu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CFU_1973 (ligD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfu03400]
    CFU_1973 (ligD)
DNA repair and recombination proteins [BR:cfu03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CFU_1973 (ligD)
SSDB
Motif
Pfam: Ku HlyD_3
Other DBs
NCBI-ProteinID: AEK61804
UniProt: G0A8U1
LinkDB
Position
2318774..2319670
AA seq 298 aa
MSRRVIWKGAISFGLVHIPVALHAATSEQGLDFDWLDKRSMDPVGYKRVNKRTGREVARE
NIVKGIAYEEGQYVVLSQEEIAAAYPKTTQTIEIEAFVAATDIPFVYLQRPYYIAPINKA
AKVYALLREILHKSGKVGIAKVVIQTKQHLALLAPVGPALVLELLRWGDEVRSWDELDLP
PAGSKAAGLTAKELQMAKQLVSEMSQRWQAEDFTDTFKEQILKLVEEKIKAGDTAAVSEV
ETASADTAGAKIYDLTEMLQRSLNKSPGKAAKPRSAKAPASKRTSAAKGKPSPKRSTA
NT seq 897 nt   +upstreamnt  +downstreamnt
atgagccggcgcgtgatctggaaaggggcgatatcgttcggcctggtccatattccggtc
gccctgcatgcggcgacgtccgagcaggggctggatttcgactggctggacaagcgttcg
atggatccggtcggctacaagcgcgtcaacaaaagaaccggccgggaggtggcgcgcgaa
aacattgtcaagggcatcgcttatgaggaagggcagtacgtggtcctgtcgcaggaagaa
atcgctgccgcctatccaaagaccacgcagactattgaaatagaagcgtttgtcgccgcg
acggatattccttttgtgtacctgcagcggccttattacatagcgcctatcaacaaagca
gccaaagtgtacgcgctgttgcgcgagatactccacaaaagcggcaaggtcggcatcgcc
aaggtggtgatccagaccaagcagcacctggccctgctggcgccggtcggtccggcgctg
gtgctggagctgctacgctggggcgacgaggtgcgcagctgggacgaactggacctgccg
ccggcgggcagcaaggccgccggcctgactgccaaggaattgcagatggcgaaacagctg
gtaagtgaaatgagccagcgctggcaggctgaagatttcaccgatacgttcaaggaacag
atcctgaaactggtcgaggaaaaaatcaaggctggcgacaccgctgcggtcagcgaagtg
gaaacagcgtccgccgataccgccggcgcaaagatctatgacctcaccgaaatgcttcag
cgcagcctgaacaaaagcccaggcaaagccgccaagccgcgttcggccaaagccccggcc
agcaaaaggacgtcggcagccaagggcaaaccttcccctaaacgttcaacagcctga

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