Collimonas fungivorans: CFU_2008
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Entry
CFU_2008 CDS
T01583
Symbol
cmpR
Name
(GenBank) transcriptional regulator, LysR family
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
cfu
Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfu03000
]
CFU_2008 (cmpR)
Transcription factors [BR:
cfu03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CFU_2008 (cmpR)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_30
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AEK61839
UniProt:
G0A8X6
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Position
complement(2359571..2360500)
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AA seq
309 aa
AA seq
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MKNATLRQLKTFETVARHLSYSRAAEELHLTQPAVSLQVKQLEEHAGLPLFEQLGKKIYL
TAAGVEMLRHGRMIIQQFREAEDAMAQLKGVSGGRLNVAVISAGDYFFPRLLAEFQRRHE
NVSLKLTVHNREELLRNLQENQTDLAIMVRPPEDPGMVRRAFAPHPYVIVASPQHPLAGK
KRIPMARLMREPFIVRERGSDTWNSMQESFGDHLAQLNVAMEIKSFETIKQAVIAGMGIS
FLSVHTISLELQVGNLVVLDVQGFPAMLNWYVVHRQHKQLPPVAIAFENFLMSDGAQLIE
TFTRFKLKS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgctacgttgcggcagctgaaaaccttcgagaccgtggcacgccacctgagt
tattcgcgggcggcggaagaattgcacctgacgcagccggcggtgtcgctgcaggtcaag
cagcttgaggaacacgcaggcctgcccttgttcgagcagctgggaaagaaaatctacctg
actgccgcaggcgtggaaatgctgcggcatggacgcatgatcatccagcagttccgtgaa
gcggaagatgcgatggcgcagctgaaaggcgtctccggcggccggttgaatgtcgccgtg
atcagcgccggcgattattttttcccgcgcctgctggccgagttccagcgccgccatgaa
aacgtcagcctcaagctgaccgtgcataaccgcgaagaattgttgcgcaacctgcaggag
aaccagaccgacctggcgatcatggtcaggccgccggaagatcccggcatggtccggcgc
gcgttcgcaccccacccttacgtcatcgtggcttcaccccagcatccgctggccggcaag
aagcggattccgatggcgcgcttgatgcgcgaaccgttcatcgtgcgcgaaagaggttcg
gatacctggaattccatgcaggagagttttggcgaccacctggcgcagctcaatgtggcc
atggagatcaagagctttgaaaccatcaagcaggcggtgatcgcaggcatgggcatcagc
ttcctgtcggtgcataccatcagcctggagctgcaggtcggcaacctggtggtgctggac
gtccagggttttccggcgatgctgaactggtacgtggtgcatcgtcagcacaagcagctg
ccgccggtggcgatcgccttcgagaatttcttgatgagcgacggggctcagctgattgaa
acgtttacccgtttcaaattgaaatcttaa
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