Collimonas fungivorans: CFU_2111
Help
Entry
CFU_2111 CDS
T01583
Name
(GenBank) DinG family ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CFU_2111
09124 Replication and repair
03420 Nucleotide excision repair
CFU_2111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfu03021
]
CFU_2111
03400 DNA repair and recombination proteins [BR:
cfu03400
]
CFU_2111
Enzymes [BR:
cfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CFU_2111
Transcription machinery [BR:
cfu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CFU_2111
DNA repair and recombination proteins [BR:
cfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CFU_2111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Helicase_C
T3SS_HrpK1
Motif
Other DBs
NCBI-ProteinID:
AEK61941
UniProt:
G0AGT6
LinkDB
All DBs
Position
2465119..2467392
Genome browser
AA seq
757 aa
AA seq
DB search
MGGAVRVSEPAYVVAVRALCEFTAKQGDLDLRFTPAPTALEGIAGHATVASRRAAGYEKE
ISLSGRCGPLLVRGRADGYDPALNRLEEIKTFRGDLERMPDNHRHLHWAQVRIYGHLLCQ
ARQLPELQLALVYYDIGRQKETLLTECATAAGLQQFFDDQCGRFLAWAQQEMAHRAARDE
QLTALRFPHADFRPGQRALAEAVYKGASAGRCLLAQAPTGIGKTIGSLFPLLKASPGQGL
DKIFFLSAKTSGRALALEASARIKHSAAGLPLRVLELVARDKACEHPDKACHGESCPLAQ
GFYDRLPQARSAAVASGAMDRESLREIAAEHGVCPYYLSQDLVRWSDVIVGDYNYYFDLS
AMLYGFTIANQWRVGVLVDEAHNMIERARKMYSADMEQAALKSVRQTAPPVLKRVLDRVN
RQWNALYKTQEGEYQRYAELPDAFIQALQQAVADITDYMTEHPAAVDSRLLQFYFDAMHF
TRIAELFDSHSLFDITRHGGHGATLCLRNIVPATFLAPRFAAAHSTTLFSATLSPWHFYS
KTLGMPDNTAWLDVPSPFTADQLSVRLVTGISTRFQHRDRSLAPIAELIAKQYTEQPGNY
LTFFSSYDYLEKVAAVFASRYPDIPLWQQARRMDEREREHFLSRFTETSQGVGFAVLGGA
FAEGIDLPGARLIGAFIATLGLPQINPVNEQVMLQMDKLFGQGYDCTYLYPGLQKVVQAA
GRVIRTQQDRGVVYLIDDRFARQEVRQLLPAWWQLAG
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
gtgggcggagcagtgcgcgtgagcgagcccgcctatgtagtagcggtccgcgcgctgtgc
gagttcacggccaagcagggcgacctcgacctgcgcttcacgcccgcgccgaccgcgctg
gaaggcattgccggccacgccacggtggcgtcgcgccgcgctgccggctatgagaaagaa
atcagcttgagcggccgctgcgggccattgctggtgcgcggccgcgccgacggctacgat
ccggccttgaaccggctggaagaaatcaagaccttccgcggtgacctggagcgcatgccg
gacaaccaccgccatctgcactgggcgcaagtgcgcatctacggccacttgctgtgccag
gcgcgccagctgccggaactacagctggcgctggtgtactacgacatcggcaggcagaaa
gaaaccctgctgaccgaatgtgcgacggccgccggcctgcaacaatttttcgatgatcaa
tgcggccgcttcctggcctgggcgcaacaggaaatggcgcatcgcgccgcgcgtgacgag
caattgaccgccttgcgcttcccgcatgccgatttccgccccggccagcgcgccctggcg
gaagccgtgtacaagggcgccagcgccggccgctgcctgctggcccaggcgccgaccggc
atcggcaagaccatcggcagcctgttccccttgctcaaggccagcccgggccagggcctg
gacaagatatttttcctttccgccaagacctcgggccgcgcgctggcgctggaagcaagc
gcgcgcatcaagcacagcgcggccggattgccgttgcgggtgctggaactggttgcgcgc
gacaaggcgtgtgagcatccggacaaggcctgccacggcgaatcctgtccgctggcccag
ggtttttacgatcgcctgccgcaagcgcgcagcgccgccgtcgccagcggcgcgatggac
cgggaaagcctgcgcgaaatcgctgctgaacacggtgtctgtccttattacctgagccag
gacctggtgcgctggtcggacgtgatcgtcggcgactacaactattacttcgacctgagc
gccatgctgtacggtttcaccatcgccaaccagtggcgggtaggggtgctggtcgacgaa
gcgcacaacatgatcgagcgggcgcgcaagatgtattcggccgacatggagcaagccgcc
ctgaaaagcgtgcggcagactgcgccgccggtgctcaagcgtgtgctggaccgcgtcaac
cgccagtggaacgctctgtacaagacgcaggaaggcgagtaccagcgctatgccgaactg
ccggatgcattcatccaggcgctgcaacaggcggtggcggacatcaccgactacatgacc
gagcatccggccgccgtcgacagccgcctgctgcaattctatttcgacgccatgcacttc
acccgcatcgccgagctgttcgacagccactcgctgttcgacatcactcgccatggcggc
cacggcgccacgctatgcctgcgcaacatcgtgccggcaacgttcctggcgccgcgcttt
gccgcagcccattcgacaacgctgttctccgccacgctcagcccctggcatttttacagc
aagacgctgggcatgccggacaacaccgcctggctcgatgtgccgtcgccgttcaccgcc
gaccagttgtcggtgcggctggtgaccggcatttcaacccgtttccagcatcgcgaccgt
tcgctggcgccgatcgccgaactgattgccaaacagtacacagagcagccaggcaactac
ctgacgtttttcagcagctacgactacctggagaaagtcgccgccgtgttcgcctcgcgc
tatcccgatatccctttgtggcagcaggcgcgtcgcatggatgaacgggaacgggagcat
ttcctgtcgcgttttaccgaaacctcgcaaggcgtcggttttgcggtgctgggcggcgcg
ttcgccgagggcatcgacttgcccggcgcgcgcctgatcggcgctttcatcgccaccctg
ggactgccgcagatcaatccggtcaatgaacaggtcatgctgcagatggataaacttttc
ggccagggttacgactgcacctacctgtatcccggcctgcagaaagtagtgcaggccgcc
ggccgggtgatccgaactcagcaggaccgcggcgtggtatacctgatcgatgacaggttc
gcgcggcaggaagtcaggcagctgttgcctgcatggtggcagctggccggctga
DBGET
integrated database retrieval system
