Collimonas fungivorans: CFU_2428
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Entry
CFU_2428 CDS
T01583
Name
(GenBank) DNA polymerase, bacteriophage-type
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFU_2428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfu03400
]
CFU_2428
Enzymes [BR:
cfu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CFU_2428
DNA repair and recombination proteins [BR:
cfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFU_2428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEK62255
UniProt:
G0AH11
LinkDB
All DBs
Position
complement(2892697..2893545)
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AA seq
282 aa
AA seq
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MSEMTRRSVFLDEIGLGPLWLRRDGGLASAEPIEADDMAPMEEIPAAALHGQQPAPVAHA
VQDKAEISAWGDDEPISAPSAAVHAAQSPAAMDWTQLQAAVAGCTACGLCQGRKNTVFGV
GDSKAKWLFIGEGPGRNEDIQGEPFVGPAGKLLDNILLAMGLKRGDNAYIANIVKCRPTD
GTGRDRPPAADEVAACMPYLQRQIELIQPTILVALGKTAALSLLGLDAATPVSKLRGTVH
RYADRPLVVTYHPAYLLRQLGDKGKVWSDLCLAMSAYANAAE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagatgaccaggcgtagcgttttcctcgacgagataggcctcggcccgctgtgg
ctgcggcgcgatggcggcttggcgagcgccgagccgatcgaagccgacgacatggcgccc
atggaggaaattcctgcagcggcactgcacgggcaacagcccgcaccggtggcgcatgca
gtgcaggacaaggccgagatctcggcctggggcgacgacgagcccatatccgcaccatcg
gcagccgtccatgcagcgcaatctccggccgccatggactggacgcaattgcaggcggcc
gtggccggctgcactgcttgcggactttgccaggggcgcaagaataccgtgttcggcgtc
ggcgacagcaaggcaaaatggctgtttatcggcgagggtccgggacgcaacgaggatatc
cagggcgaaccgtttgtcggcccggccggcaagctgctcgacaatatcctgctggcgatg
ggcctgaagcgcggcgacaacgcctacatcgcgaatatcgtcaaatgccggcccaccgac
ggcaccggccgcgaccgtccgccggcggcagacgaagtggcggcttgcatgccgtatctg
cagcgccagatcgagctgatacagcccaccatcctggttgcgctgggcaagaccgcagcc
ttgtcgctgctcgggctggatgcggcgacgccggtgtcgaaactgcgcggcaccgtacat
cgctacgccgaccgtccgctggtggtgacttatcacccggcttacctgctgcgccagctg
ggcgacaaaggcaaggtctggagcgacctgtgcctggccatgagcgcctatgccaacgct
gccgaataa
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