Collimonas fungivorans: CFU_2685
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Entry
CFU_2685 CDS
T01583
Symbol
rocR
Name
(GenBank) Arginine utilization regulatory protein r
KO
K06714
arginine utilization regulatory protein
Organism
cfu
Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfu03000
]
CFU_2685 (rocR)
Transcription factors [BR:
cfu03000
]
Prokaryotic type
Helix-turn-helix
Other families
CFU_2685 (rocR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_4
AAA_5
Mg_chelatase
PAS
AAA
HTH_50
PAS_8
HTH_20
HTH_8
AAA_2
PAS_9
HTH_30
MCM
PAS_7
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
AEK62512
UniProt:
G0AHA6
LinkDB
All DBs
Position
3199702..3201120
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AA seq
472 aa
AA seq
DB search
MDTELASALAIFSQLFDAMPQPVAIIDSEGNYVYYNQESAKIDAYPAERAVGHPLLDIYP
AMDAESSTLLQALHHGKRYTGAFQAFINAQGRLVQQIHTTLPLLNRRGAVVGAVEIARDL
AAAGSDDGASAIAPNKQEACRHGIVSQDPAMQVLIRQAEALGKAGVNVLLCGETGTGKEL
FARLLHQSSQRAGAPSPSLSPFVVLNCAAIPETLFESTLFGTARGAFTGAQERQGLIETA
NSGTLFLDELNSLPWSVQGKLLRVLQDGMFSRVGSNKEIRADLRVIAAANETQQEMLAAR
KLRPDLLYRLNIGQLSIPPLRERCGDIPLLAEAFLHKHRGVAGGRVKRIAPAAMRQLQAC
RWPGNVRMLENVMQRSLIFCETGDELQAIWIGEDAADTRSHDAPAEPVADTQGQGSGLSL
EEQMSSYEKTLLIGLLKEHASLSEVARRCAIPRATLQYKLKKHNITLHRSAS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggatacagaactagccagcgcactggcgattttttctcagctgttcgacgcgatgccg
cagccggtcgccatcatcgatagcgagggcaactatgtctattacaaccaggagagcgcg
aagatagacgcctatcccgccgagcgcgcagtcggccatccattgctggatatttatcct
gccatggatgcggaaagcagcaccttgctgcaagccctgcatcacggcaagcgctacacc
ggcgccttccaggccttcatcaatgcgcaaggccggctggtgcagcagatccataccacc
ttgccgttgctgaaccggcgcggcgcggttgtcggcgccgtggaaatcgcgcgcgacctg
gccgctgccggcagcgacgacggcgcctcagccatcgcgccaaacaaacaggaggcatgc
cggcatggcatcgtcagccaggaccccgccatgcaggtcttgatacgccaggctgaagcg
cttggcaaggcaggcgtcaacgtgctgctgtgcggcgagacaggaaccggcaaagagctc
ttcgcgcgcctgttgcaccagtccagtcagagagccggcgcgccgtcgccatcgctgtca
ccatttgttgtgctgaattgcgcggcgattccggaaaccctgtttgaaagcaccctgttc
ggcacggcccgcggcgccttcaccggcgcccaggaacggcagggcctgatcgaaacggcg
aattcaggaaccctgttcctcgatgaattgaattccctgccctggtcggtgcaaggcaag
ctgctgcgggtgctgcaggatggcatgttcagccgggtcggcagcaacaaggaaatccga
gccgacctgcgcgtcatcgccgccgccaacgaaacgcaacaggaaatgctcgcggccagg
aagctgcgtcccgatctgctgtaccggctgaacatcgggcagctgtcgattccgccgctc
agggaacggtgcggcgacatcccgctgctggcggaagcattcctgcacaagcatcgtggc
gtcgccggcggccgcgtcaagcggatcgcccctgccgccatgcggcagctgcaggcgtgc
cgctggccgggcaatgtccgcatgctggaaaacgtcatgcagcgcagcctgattttctgc
gaaaccggcgacgagctccaggctatctggataggggaggatgcggccgatacccggtcg
catgacgcaccggcggaaccggtggcggacacgcaaggccaaggcagcggcctgtcgctg
gaagagcagatgtcatcttacgaaaaaacgctgctgataggtttgctcaaggagcacgcc
agcctgtccgaagtggcacgacgttgcgccatcccgcgcgccaccctgcagtacaaactc
aagaaacacaacatcacgctgcatcgcagcgcctcctga
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