Collimonas fungivorans: CFU_2813
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Entry
CFU_2813 CDS
T01583
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu03030
DNA replication
cfu03430
Mismatch repair
cfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFU_2813 (dnaX)
03430 Mismatch repair
CFU_2813 (dnaX)
03440 Homologous recombination
CFU_2813 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfu03032
]
CFU_2813 (dnaX)
03400 DNA repair and recombination proteins [BR:
cfu03400
]
CFU_2813 (dnaX)
Enzymes [BR:
cfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFU_2813 (dnaX)
DNA replication proteins [BR:
cfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFU_2813 (dnaX)
DNA repair and recombination proteins [BR:
cfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFU_2813 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_16
AAA_22
AAA_14
DNA_pol3_tau_5
AAA_18
AAA_30
nSTAND3
AAA_2
Glyco_tranf_2_5
TsaE
AAA_assoc_2
Herpes_Helicase
AAA_24
AAA_19
AAA_28
Rad17
Motif
Other DBs
NCBI-ProteinID:
AEK62639
UniProt:
G0A9L6
LinkDB
All DBs
Position
complement(3341211..3343322)
Genome browser
AA seq
703 aa
AA seq
DB search
MSYQVLARKYRPRSFDTLVGQEHVVRALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK
SLNCIGADGTGGITATPCGVCEACVAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP
SNARFKVYMIDEVHMLTNHAFNSMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIISHLDNILGQEQIEFETPALRLLAQGAHGSMRDALSLTDQAIAYAAGKVTLE
AVQGMLGALDQSYLIRVLDALAAKDGPGLLAVADDMASRSLSYSAALQDLGTLLHRIALA
QSVPAALADDLPEREEVIRLSGLFDAEEIQLFYQIAVHGRNELGLAPDEYAGFSMTLLRM
LAFRPQADGSIAAPPPVSRPRPQASTAPAAAAPAASRPPAQAAPTAARLSSAPPTLSTSA
PVVPLAPPAGNGGMSPARAALEAARAASSRKGGAPARPQPSQAPAAPVSQPAAAVADAKP
AAPAYVQQVPQNSSVPPWEEEIPLPMDLPDTEFSSSAAEKKTESYSPPAPPSRSVAANGA
VSNGRQPVRAEPVVQQPAAAPEPLPPLVLQPDPNLNWDGNWPLLASTLAVRGVAHQLAQQ
SELVKSDSSGPAAQFHLRIPFDTLRSAGSVDKLEVALSEHFGRPVKVETELGTVRHTANA
QMLAAQAERQRLAELTAHSDPFIQSMMREFGASIVPGSIKPLG
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcctaccaagttctcgcccgtaaatatcgccccagaagcttcgatacgctggtcggc
caggaacacgtcgtaagggctttgacgcacgccttggagcaacagcgcctgcaccacgcc
tatttatttaccggcacgcgcggcgtcggcaagaccaccttgtcgcggatcctggcgaaa
tcgctcaattgcatcggcgccgacggcaccggcggcatcacggcgacgccgtgcggcgtg
tgcgaagcgtgcgtggcgatcgacgccgggcgctttgtcgactatatcgagatggacgcg
gcctcgaaccgcggcgtcgacgaaatggcgcagttgctggagcaggctgtgtatgcgccg
tccaatgcgcgcttcaaggtctatatgatcgacgaagtgcacatgctcaccaaccacgct
ttcaactcgatgctgaagacgctggaagagccgcctgaacatgtcaagttcatcctggcc
accaccgacccgcaaaaaatcccggtgacggtgctgtcgcgctgcctgcagttcaacctg
aagcagatgccgcccggccatatcatcagccacctggacaatatcctgggccaggagcag
atcgaattcgaaaccccggccctgcgtttgctggcgcaaggcgcccacggttcgatgcgc
gatgcgctgtcgctgaccgaccaggcgatcgcctatgccgccggcaaggtgacgctggaa
gcggtgcagggcatgctcggcgcgcttgaccagtcttacctgatccgcgtgctggatgcg
ctggcggcgaaagacggccccggcttgctggcggtggccgacgacatggccagccgcagc
ttgtcgtacagcgcggcgctgcaagacctgggcacgttgctgcatcggatagcgctggcg
caaagcgtgccggcagccctggccgacgatctgccggaacgcgaagaagtgatccggctg
tcgggcttgttcgacgccgaagaaatacaactgttttaccagatcgccgtacacggccgc
aatgaactcggcctggcgccggacgaatatgccggtttttcgatgaccctgctgcgcatg
ctggcgttccgtccgcaagctgacggcagcattgcggcgccgccgccggtcagccgtccg
cggccgcaggcaagcactgcgccagccgcagccgcgcctgctgcatcgagaccgccagcc
caggcggcgccaaccgccgcccgcctgagcagcgcaccgccgacgctcagcaccagcgcg
ccagttgtacctcttgcgccccccgccggcaacggcggcatgagcccggcccgggctgcg
ctggaagctgcgcgcgcagcgtcttcccgcaagggcggcgcaccggcgcggccgcagcca
agccaggcgccggcagcgccggtcagccagccagccgcggcggtggcggacgccaaaccg
gcggcgccggcgtatgtgcagcaagtaccgcagaattcctctgtgccgccttgggaagaa
gagatcccgctgcccatggatttgccggacaccgaattttccagttcggcggctgaaaaa
aaaactgagtcatattcaccgccagcccctccgtcgcgctcagttgccgccaacggcgca
gtgagtaatggccgccagcctgtgcgcgctgaaccggtggtgcagcagccggcagctgcg
ccggagccgctaccgccgctggtgctgcagcccgatccaaacctgaactgggacggcaac
tggcccttgctggcttccaccctggcggtgcgcggtgtggcgcatcagctggcgcagcag
agcgagctggtcaagtccgacagcagcggcccggcagcccagttccatctgcggattccg
ttcgacaccttgcgctcggccggcagtgtcgataagttggaggttgcgctgagcgagcat
ttcggccgcccggtcaaggtggaaaccgaactcggtacggtgcgccataccgccaacgcg
cagatgctggcggcgcaggcagagcgccagcgcctggcggaactgaccgcgcacagcgat
cccttcatccagagcatgatgcgtgaattcggcgcctcgatcgtgccgggatcgatcaag
cccttgggctga
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