KEGG   Collimonas fungivorans: CFU_2870
Entry
CFU_2870          CDS       T01583                                 
Symbol
rnc
Name
(GenBank) Ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
cfu  Collimonas fungivorans
Pathway
cfu03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cfu00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CFU_2870 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfu03019]
    CFU_2870 (rnc)
   03009 Ribosome biogenesis [BR:cfu03009]
    CFU_2870 (rnc)
   03036 Chromosome and associated proteins [BR:cfu03036]
    CFU_2870 (rnc)
Enzymes [BR:cfu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     CFU_2870 (rnc)
Messenger RNA biogenesis [BR:cfu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CFU_2870 (rnc)
Ribosome biogenesis [BR:cfu03009]
 Eukaryotic type
  90S particles
   RNase
    CFU_2870 (rnc)
 Prokaryotic type
  rRNA processing factors
   CFU_2870 (rnc)
Chromosome and associated proteins [BR:cfu03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     CFU_2870 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: AEK62696
UniProt: G0A9S3
LinkDB
Position
complement(3401142..3402143)
AA seq 333 aa
MDLMLLQNRLGHTFKDATLLQQALTHRSHSTLHNERLEFLGDSILNCVVASLLFDRYTKI
DEGDLSRVRANLVKQQSLYEIAQRLELSQFLRLGEGELKSGGFRRPSILADTLEALFGAI
FLDAGFDAARDVIRALYIPILDTVDPKTLGKDAKTLLQEYLQGKKIALPQYNVVATHGAA
HNQEFEIECLVPKLDIQVFGNGGSRRAGEQAAAKLALEAVQKAFVKAPAAPRKAKPRTAQ
LKLSGIATIQPDAPDAAPDDAAKPAAPAKDKGLVEVAAAKAPAKAHVPAANGSAEAAAPS
KAASQAAETAAAATPAAAPSNATPHTTSKSKTA
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggacctcatgttattgcagaatcggctaggccacactttcaaggatgctacgttattg
cagcaggccttgacgcatcgcagccatagcaccttgcataacgaacggttggaattcctc
ggcgattcgatcctgaactgcgtcgtcgcttcgctgttgttcgaccgttacaccaagata
gacgagggcgacctgtcgcgggtgcgcgccaacctggtcaagcagcaatcgctgtatgaa
attgcgcaaaggctggagttgtcgcaattcctgcgcttgggcgagggtgaattgaaatcc
ggcggcttccgccggccttcgatcctggccgatacgctggaagcgctgttcggtgcgatt
ttcctggacgccggtttcgacgccgcgcgcgacgtgatccgcgccttgtacatcccgatc
ctcgatacggtcgatcccaagactcttggcaaggacgccaagaccctgctgcaggaatac
ctgcaagggaaaaagatcgccttgccgcaatataacgtggtggccacgcatggcgccgcg
cacaaccaggaattcgaaatcgaatgcctggtgccgaagctggatatccaggtcttcggc
aacggcggcagccgccgcgccggcgagcaggccgccgccaagctggcgctggaagccgtg
caaaaggcattcgtgaaagcgccggcggcgccgcgcaaagccaagccgcgcaccgcgcaa
ttgaaactgagcgggatcgcgacgatccagccggatgcgcccgatgccgcgccggacgat
gccgccaaaccggctgctccggccaaggacaaaggcctggttgaagtcgcggcggccaag
gcgcctgccaaagcccacgtgcctgccgccaacggcagcgctgaagcggctgctccatcc
aaggcagccagccaggctgcggaaaccgcggccgccgcaaccccggcggcagccccatcc
aatgcaacaccccatactacgagtaaatcgaaaaccgcatga

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