Collimonas fungivorans: CFU_3082
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Entry
CFU_3082 CDS
T01583
Symbol
soxB
Name
(GenBank) Sarcosine oxidase beta subunit
KO
K00303
sarcosine oxidase, subunit beta [EC:
1.5.3.24
1.5.3.1
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00260
Glycine, serine and threonine metabolism
cfu01100
Metabolic pathways
Module
cfu_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CFU_3082 (soxB)
Enzymes [BR:
cfu01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
CFU_3082 (soxB)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
CFU_3082 (soxB)
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Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
Thi4
FAD_binding_2
FAD_oxidored
Pyr_redox_3
Pyr_redox_2
Trp_halogenase
Amino_oxidase
MCRA
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
AEK62907
UniProt:
G0ACN3
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Position
complement(3621881..3623125)
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AA seq
414 aa
AA seq
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MSNYSIFSLIRNGLSYHENWQRAWKSPEPKKEYDIVIVGGGGHGLATAYYLAKVHGLRNI
AVIEKGWIGGGNTARNTTIVRSNYLWDESAMLYEKAMQLWEGLSQDLNYNVMFSQRGVMN
LAHTLQDVRDTDRRINANRLNGVDAEWLTPAQVKEIVPIINLNSHYPVLGASFQRRGGVA
RHDAVAWGFARGADERGVDILQNCGVTGIRRENGAVTGVDTVKGFIKAKKVAVVAAGHSS
VLAAMAGIRLPLESHPLQALVSEPIKPIIDTVVMSNAVHAYISQSDKGDLVIGAGVDQYT
GYGQRGSYHVIEGTLQAIVEMFPVLSRVRMNRQWGGIVDVSPDACPIISKTPVKGLYFNC
GWGTGGFKATPGSGWVFAHTIANDNPHPLNAPFALDRFYNGHLIDEHGAAAVAH
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattattcgatattcagcctgatccgcaatgggctctcctatcatgagaactgg
cagcgggcctggaaaagtccggaaccgaaaaaggaatacgacatcgtcatcgtcggcggc
ggcggccacggcctggctactgcctattacctggccaaggtgcacggcttgcgcaatatc
gcggtgattgaaaaaggctggataggcggcggcaataccgcgcgcaacactaccatcgtg
cgctcgaactacctgtgggacgagtcggccatgctgtatgaaaaagccatgcagctgtgg
gaaggcttgtcgcaggacctgaactacaacgtcatgttcagccagcgcggcgtgatgaac
ctggcgcataccctgcaggacgtgcgcgataccgaccgccgcatcaacgccaaccgtctc
aacggtgtcgacgccgaatggttgacgccggcgcaggtcaaggaaatcgtgccgatcatt
aacctgaacagccactacccggtgctgggcgcttccttccagcgccgcggcggcgtggcg
cggcacgatgcggtggcgtggggatttgcccgcggcgccgacgagcgcggcgtcgatatc
ctgcagaactgcggcgtgaccgggatccgacgcgagaatggcgcggtgaccggggtcgat
accgtcaaaggttttatcaaggccaagaaagtggcggtggttgctgccggccactctagc
gtattggcggccatggccggcatccgcttgccgctggaaagccaccctttgcaggcgctg
gtgtcggagccgatcaagccgatcatcgatacggtggtgatgtcgaatgcggtgcacgcc
tatatcagccagtccgacaagggcgacctggtgatcggcgccggcgtcgaccagtatacc
ggctacggccagcgcggcagttaccacgtgatcgaaggcaccctgcaggcgatcgtcgaa
atgttcccggtgctgagccgggtccgcatgaaccgccaatggggcgggatcgtcgacgtt
tcgccggacgcttgcccgatcatttccaagaccccggtcaagggcctgtacttcaactgc
ggctggggcaccggcggcttcaaggctacgccgggctcgggctgggtattcgcccacacg
attgccaacgacaatccgcaccccctgaatgcgccgtttgcgctggaccgtttctacaac
ggccacctgatcgacgaacacggcgccgctgccgtggctcactga
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