Collimonas fungivorans: CFU_3121
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Entry
CFU_3121 CDS
T01583
Symbol
lysS
Name
(GenBank) Lysyl-tRNA synthetase (class II)
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CFU_3121 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cfu01007
]
CFU_3121 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfu03016
]
CFU_3121 (lysS)
Enzymes [BR:
cfu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CFU_3121 (lysS)
Amino acid related enzymes [BR:
cfu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CFU_3121 (lysS)
Transfer RNA biogenesis [BR:
cfu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CFU_3121 (lysS)
Prokaryotic type
Other AARSs
CFU_3121 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
TUG-UBL1
Motif
Other DBs
NCBI-ProteinID:
AEK62946
UniProt:
G0ACS2
LinkDB
All DBs
Position
3668271..3669797
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AA seq
508 aa
AA seq
DB search
MTTDNQQQPVPQDENKIIAERRNKLGALRAQGVAFPNDFRPTHKAAAIQAEYAAQENETL
DVAAVKVVVAGRMMLKRVMGKASFATLQDASGSKADGRIQLFITKENIGEENYDSFKHYD
LGDILGAEGTLFKTKTGELSIKVTTLRLLTKSLRPLPDKFHGLADQETKYRQRYVDLIIN
EDTRRTFKVRTAAMSSIRRFMEQNDFMEVETPMLHAIPGGAAAKPFITHHNALDMQMFLR
IAPELYLKRLVVGGFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAYVDYQWLMNFTEQV
IRQAAIDAHGTATLTYQGRELDLSKPFQRLTIVGAINKYAPQYQDAQLQDAEFIKAELKK
FGVKPHAHAGLGALQLALFEETAEAQLWDPTYIVDYPVEVSPLARASDTVPGITERFELF
VTGREIANGFSELNDSEDQAARFQAQVAAKDAGDEEAMYYDADYIRALEYGMPPTGGCGI
GIDRLMMLITDSPNIRDVLLFPHLRRED
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagacaatcagcagcaacctgtcccgcaagacgaaaacaagatcattgcggaa
cgccgcaacaagctcggcgccctgcgcgcccaaggtgtggctttccccaacgatttccgg
ccgacgcacaaggcagccgcgatccaggccgaatacgccgcccaggaaaacgaaacgctg
gacgtggccgcagtcaaggtcgtggtcgccggccgcatgatgctgaaacgggtgatgggc
aaggcttccttcgcgaccctgcaggatgcttcgggcagcaaggccgacggccgcatccag
ctgttcatcaccaaggaaaacatcggcgaagagaactacgacagcttcaagcattacgac
ctgggcgacatcctcggcgccgaaggcacgctgttcaagaccaagaccggcgaactgtcg
atcaaggtcaccacgctgcgcttgctgaccaaatcgctgcgcccgctgccggacaagttc
cacggcctggccgaccaggaaaccaagtaccgccagcgctacgtcgacctgatcatcaac
gaagatacgcgccgcactttcaaggtgcgcaccgctgcgatgtcgtcgatccgccgcttc
atggaacagaacgacttcatggaagtcgaaacgccgatgctgcacgccatccccggcggc
gccgcggccaagcctttcatcacccatcacaatgcgctggacatgcagatgttcctgcgc
atcgcgcctgagctgtacctgaagcggctggtggtcggcggtttcgaacgcgtgtttgaa
gtcaaccgcaacttccgtaatgaaggcgtatcgccgcgccacaatcctgaattcacgatg
atggaattctatgcggcttatgtcgattaccaatggctgatgaacttcaccgaacaggtg
atccgccaggccgcgatcgatgcccacggcaccgccaccctgacctaccagggccgcgag
ctggacctgagcaagccgttccagcgcctgaccatcgtcggcgccatcaacaagtacgcg
ccgcaataccaggacgcgcaattgcaggatgcggaattcatcaaggccgagctgaagaaa
ttcggcgtcaagccgcatgcccacgccggcctcggcgcgctgcagctggccctgtttgaa
gaaaccgccgaagcgcagttgtgggatccgacctacatcgtcgactatccggtcgaagta
tcgccgctggcgcgcgcttccgataccgtgcccggcatcaccgagcgtttcgagctgttc
gtcaccggccgcgaaatcgccaacggcttctccgagctgaacgattcggaagaccaggcc
gcccgcttccaggcgcaggttgcagccaaggacgccggcgacgaagaagccatgtattac
gacgccgactacatccgcgcgctggagtacggcatgcctccgaccggcggctgcggcatc
ggcatcgaccgcctgatgatgctgatcaccgactcgcccaacatccgcgacgtgctcctg
ttcccgcatctgcgccgcgaagactaa
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