Collimonas fungivorans: CFU_3134
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Entry
CFU_3134 CDS
T01583
Name
(GenBank) conserved hypothetical protein; putative Uracil DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFU_3134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfu03400
]
CFU_3134
Enzymes [BR:
cfu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CFU_3134
DNA repair and recombination proteins [BR:
cfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFU_3134
Prokaryotic type
CFU_3134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AEK62959
UniProt:
G0ACT5
LinkDB
All DBs
Position
complement(3678456..3679244)
Genome browser
AA seq
262 aa
AA seq
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MTDFLPASIRSALTGVHASWLAILEHGLRAVAQANPAYLKDLAAADYLPTEGRMFAAFTQ
PLEAVRYVLVGEGPYPRAASATGVCFMDGAVGSLWSEKGLSKQVNRATSLRNFMKMLLVA
DGQLALENTTGDAMSDVALQAQKDGSQAIQLLADLQDNMVKRGFLLLNASLVFRPDVPPV
KDAKAWQPFMQAVLQGLADAADKRGEDLPTLVLWGKIAEQLNAYPVTARFPKAVAEHPYN
LSFIGNAGMQALFGPMQLLRRT
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgactgattttcttcctgcttcaatccgttccgcgttgaccggcgtgcatgcttcctgg
ctcgccatcctggagcacggcttgcgcgcggtggcgcaagccaatccggcctacctgaag
gacttggccgcggccgattacctgcctaccgagggccgtatgtttgccgccttcacccag
ccgctggaagcggtgcgttatgtgctggtgggcgagggaccttatccgcgcgcggccagc
gccaccggcgtctgtttcatggacggcgcggtcggctccctgtggtcggagaaggggctg
tcgaagcaggtcaaccgcgcgacttccctgcgcaatttcatgaagatgctgctggtcgcc
gatggccagctggcgctggaaaacacgaccggcgatgcgatgtcggatgtggcgttgcag
gcgcagaaggacggttcacaggcgatccagctgctggccgacctgcaggacaacatggtg
aaacggggatttttgctgctgaacgcttcgctggtgttccgtccggacgtgccgccggtc
aaggacgccaaggcctggcagccgttcatgcaggcagtgttgcaggggctggccgatgcc
gcggacaaacgcggcgaggatctgccgacgctggtgttgtgggggaaaatcgccgagcag
ctgaatgcctacccagtgactgcgcgctttccgaaagcagtcgccgagcacccatacaat
ctcagcttcatcggcaacgccggcatgcaggccctgttcgggccgatgcagctgttgcgg
cgtacttag
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