Collimonas fungivorans: CFU_3400
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Entry
CFU_3400 CDS
T01583
Symbol
glyA2
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00260
Glycine, serine and threonine metabolism
cfu00460
Cyanoamino acid metabolism
cfu00630
Glyoxylate and dicarboxylate metabolism
cfu00670
One carbon pool by folate
cfu00680
Methane metabolism
cfu01100
Metabolic pathways
cfu01110
Biosynthesis of secondary metabolites
cfu01120
Microbial metabolism in diverse environments
cfu01200
Carbon metabolism
cfu01230
Biosynthesis of amino acids
cfu01240
Biosynthesis of cofactors
cfu04981
Folate transport and metabolism
Module
cfu_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CFU_3400 (glyA2)
09102 Energy metabolism
00680 Methane metabolism
CFU_3400 (glyA2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CFU_3400 (glyA2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CFU_3400 (glyA2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CFU_3400 (glyA2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CFU_3400 (glyA2)
Enzymes [BR:
cfu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CFU_3400 (glyA2)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AEK63224
UniProt:
G0AD40
LinkDB
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Position
complement(3973448..3974707)
Genome browser
AA seq
419 aa
AA seq
DB search
MEYHMFEKNHTLANVDPELWSAIQKENHRQQEHIELIASENYTSPAVMEAQGTQLTNKYA
EGYPGKRYYGGCEFVDIAEQLAIDRVKELFGAEAANVQPNSGSQANQGVFFAMLKPGDTI
MGMSLAEGGHLTHGMALNMSGKWFNVVSYGLNEKEEIDYEAFERLAHEKKPKLIIAGASA
YALRIDFERMSKVAKAVGAYFMVDMAHYAGLIAAGEYPNPVPHADFVTSTTHKSLRGPRG
GIILMKAEFEKAINSAIFPGIQGGPLMHVIAGKAVAFKEALTPEFKAYQQQVVKNADALA
KALIARGLRIVSGRTESHVMLVDLRAKKITGKEAEAILGSAHMTCNKNAIPNDPEKPFVT
SGIRVGSPAFTTRGFKEAEATKVGNLIADVLDNPHDAATIERVKAEVKKLTDAFPVYAA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ttggagtatcatatgttcgaaaaaaaccataccctcgccaatgtcgatccggaattgtgg
agcgccatccagaaagaaaaccaccgccagcaagaacacatcgagctgatcgcgtcggaa
aactacacttcgcctgccgtgatggaagcgcaaggcacgcagctgaccaacaagtacgct
gaaggttatccaggcaagcgttattacggcggctgcgaattcgtcgacatcgccgagcag
ctggcgatcgaccgcgtcaaggaactgttcggcgccgaagccgccaacgtccagcctaac
tccggctcgcaagccaaccaaggcgtgtttttcgccatgctcaagccaggcgacaccatc
atgggcatgtcgctggccgaaggcggccacctgacgcacggcatggcgttgaacatgtct
ggcaaatggttcaacgtggtgtcctacggcctcaacgaaaaagaagaaatcgattacgaa
gcattcgaacgcctggcgcacgaaaagaagccgaagctgatcatcgccggcgcttcggcc
tacgccctgcgcatcgatttcgagcgcatgtctaaagtagccaaggcggtcggcgcttac
ttcatggtcgacatggcgcactacgccggcctgatcgccgccggcgaatatccgaatccg
gtgccgcacgccgacttcgtgacgtcgactacccacaaatccctgcgaggcccgcgcggc
ggcatcatcctgatgaaggccgagttcgaaaaagccatcaattcggcgattttcccaggc
atccagggcggtccgctgatgcacgtcatcgccggcaaggcggtagcgttcaaggaagcg
ctgacgccggaattcaaggcttaccagcagcaggtggtgaagaatgccgacgccctggcg
aaagcactgatcgcacgcggcttgcgcatcgtttccggccgtaccgaatcgcacgtgatg
ctggtcgacctgcgcgccaagaagatcaccggcaaggaagccgaagcgatcctgggttcg
gcgcacatgacttgcaacaagaacgcgattcctaacgatccggaaaagccgttcgtcact
tccggcatccgtgtcggcagcccggcgttcactacccgcggattcaaggaagcggaagcg
accaaggtcggcaacctgatcgccgacgtgctggacaatccgcatgacgcagcgaccatc
gaacgggtcaaggccgaagtcaagaaactgaccgacgctttcccggtatacgcagcctga
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