Collimonas fungivorans: CFU_3535
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Entry
CFU_3535 CDS
T01583
Symbol
prpR
Name
(GenBank) Propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
cfu
Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfu03000
]
CFU_3535 (prpR)
Transcription factors [BR:
cfu03000
]
Prokaryotic type
Helix-turn-helix
Other families
CFU_3535 (prpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA
AAA_5
AAA_2
RWP-RK
HTH_17
Xre-like-HTH
FtsK_SpoIIIE
HTH_11
AAA_16
HTH_Tnp_ISL3
TniB
Motif
Other DBs
NCBI-ProteinID:
AEK63359
UniProt:
G0AAR5
LinkDB
All DBs
Position
4124260..4125909
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AA seq
549 aa
AA seq
DB search
MARPLHSSSNRDNDLPVIWTVSVSRLFDLFRDITLEFDHQANIAPIQLGFEDAVQHIRER
LATERCDAVIAAGSNGAYLKSRLSVPVIIAKASGFDVMQALARARRITPRVGVITYQASM
PALAEFQAAFDLSIEQRSYATEEDARAQVNDLKASGIKAIVGAGLITDLAEEAGLSGIFV
YSAASIRQAFNDALELARLSQLQLESTGGRSYPASYSENDTLRAKHGISDLRGPSDAMEA
IRRSVTLFARSPANVLIHGETGSGKELAAQAIHREHPLAQGTAGARGSRPFVAVNCGAIA
ESLLESELFGYEEGAFTGSRRGGRAGLFEAAHRGTLFLDEIGEMPLALQTRLLRVLEERE
VVRVGSTRPIAVDVRIISATHCDLEERVRDGRFRADLFYRIGVLRLNLPPLRARPDDLVA
LAEWCLKQALASLDVRPHANLHAEVVACAPLLESYAWPGNVRELRNVMERVALFLSAEPL
RSMTPAFLLAAAPELATGAAALPAAVAPAVVESAAQVLARFDGNRAAAAQYLGVSRTTLW
RKLREQQER
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccccctgcactcctccagcaaccgcgacaacgacctgccggtcatctggacc
gtttcggtatcgcgcctgttcgacctgttccgcgacatcacgctggaattcgaccaccag
gccaatatcgcgcctatccagctgggcttcgaagacgcggtccagcacatccgcgaacgg
ctggcgacggaacgctgcgacgccgtgatcgccgccggctccaacggcgcctacctgaag
agccgcttgtcggtgccggtcatcatcgccaaagccagcggcttcgacgtcatgcaggcg
ctggcaagggcgcgcaggatcacgccgcgggtcggcgtcatcacctaccaggcgtcgatg
ccggcgctggccgagttccaggccgcgttcgacctcagcatcgaacagcgcagctacgcc
accgaggaagatgcccgggcccaggtcaacgacctgaaagcgagcggcatcaaggcgatt
gtcggcgccgggctgattaccgacctcgccgaggaagccgggctgagcggcatttttgtc
tactccgcggcctcgatccggcaagcgttcaacgatgcgctggagctggcgcgcttgtcc
cagctgcagctggaatcgaccggcggccgcagctatccggccagctattcggaaaatgat
acgctcagggccaagcacggcatcagcgatttgcgcggcccatccgacgccatggaagcg
atacgcaggtcggtcacgctgtttgcgcgctcgccggccaacgtcctgatccatggcgaa
accggcagcggcaaggagctggcggcgcaggcgatccatcgcgaacatccgctggcgcag
ggtacggccggcgcccgcggcagccggccttttgtagcggtgaattgcggcgcgatcgcc
gaatcgttgctggagtcggaattgttcggctacgaagaaggcgcgttcaccggctcgcgc
cgcggcggccgcgccggcctgtttgaggccgctcaccgcggtaccctgttcctcgatgaa
atcggcgaaatgccgctggcgctgcaaacccggttgctgcgcgtgctggaagagcgggaa
gtggtgcgggtaggttccacccgcccgatcgcggtcgatgtccgcatcatcagcgccacc
cattgcgaccttgaggaaagagtacgcgacggccgttttcgcgcggacttgttttaccgc
atcggcgtcttgcgcctgaatttgccgccgctgcgcgcgcgtccggacgacctggtggca
ttggcggaatggtgcctgaaacaggcgctggcgtcgctcgacgtgcggccgcacgccaac
ctgcacgccgaggttgtggcttgcgcaccgctgctggaaagttatgcctggcccggcaat
gtgcgcgagctgcgcaatgtgatggaacgggttgccctgttcctctcggccgagccattg
cgctcgatgacgccggccttcctgctggcggcggcgccggaattggcgaccggggctgct
gcgctgccggcggctgtagcgccggcagtggtggaatccgcggcgcaggtgctggcaaga
tttgacggcaaccgcgcggcggcggcgcagtaccttggcgtcagccgcactaccctatgg
cgcaagctgagggaacagcaggagcgataa
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integrated database retrieval system
