Collimonas fungivorans: CFU_3556
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Entry
CFU_3556 CDS
T01583
Symbol
lpd
Name
(GenBank) Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00010
Glycolysis / Gluconeogenesis
cfu00020
Citrate cycle (TCA cycle)
cfu00260
Glycine, serine and threonine metabolism
cfu00280
Valine, leucine and isoleucine degradation
cfu00310
Lysine degradation
cfu00380
Tryptophan metabolism
cfu00620
Pyruvate metabolism
cfu00630
Glyoxylate and dicarboxylate metabolism
cfu00640
Propanoate metabolism
cfu00670
One carbon pool by folate
cfu00785
Lipoic acid metabolism
cfu01100
Metabolic pathways
cfu01110
Biosynthesis of secondary metabolites
cfu01120
Microbial metabolism in diverse environments
cfu01200
Carbon metabolism
cfu01210
2-Oxocarboxylic acid metabolism
cfu01240
Biosynthesis of cofactors
Module
cfu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cfu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
cfu_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
cfu_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CFU_3556 (lpd)
00020 Citrate cycle (TCA cycle)
CFU_3556 (lpd)
00620 Pyruvate metabolism
CFU_3556 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
CFU_3556 (lpd)
00640 Propanoate metabolism
CFU_3556 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CFU_3556 (lpd)
00280 Valine, leucine and isoleucine degradation
CFU_3556 (lpd)
00310 Lysine degradation
CFU_3556 (lpd)
00380 Tryptophan metabolism
CFU_3556 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CFU_3556 (lpd)
00670 One carbon pool by folate
CFU_3556 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfu04147
]
CFU_3556 (lpd)
Enzymes [BR:
cfu01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
CFU_3556 (lpd)
Exosome [BR:
cfu04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
CFU_3556 (lpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Biotin_lipoyl
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl_2
FAD_oxidored
AlaDh_PNT_C
Pyr_redox_3
NAD_binding_8
PYNP_C
GCV_H
GIDA
HI0933_like
RnfC_N
FAD_binding_2
Thi4
DUF4813
3HCDH_N
DAO
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AEK63380
UniProt:
G0ADB8
LinkDB
All DBs
Position
complement(4146083..4148179)
Genome browser
AA seq
698 aa
AA seq
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MSMVEVKVPDIGDVKEVEVIELMVKVGDTVKVDQSLITVESDKASMEIPSSQAGVIKEIK
VKVGDKVSEGSLILVVEAAGAAAAAPAAAAPAPAATAAPAAAAAPAAAGVASTIEIKVPD
IGDVKEVDVIELMVKVGDSVKVDQSLITVESDKASMEIPSSQAGVIKEVKVKVGDKVSEG
SVIVLLETTGAAAAAPAGAAPAPAAAPAAPAVAAPAAVRFAGKVDIECDTMVLGAGPGGY
TAAFRAADLGQSVVMIERYPSLGGVCLNVGCIPSKALLHAAKVITEAEEMAHFGVKMSAP
EIDIDALRGWKESVIKKLTGGLSGLSKARKVQVLTGKGEFSSANTITVATADGPKVVGFK
NAIIAAGSSVARIPGFPYDDPRLIDSTGALELRQIPKKLLVIGGGIIGLEMACVYDALGS
KVTVVEFADGLIPAADRDIVKPLQKRIEKRYEAIYLKTKVTKLEALKEGLRATFEGADSS
SPAAPEPQLYDMVLVAVGRRPNGKDIAAEKAGVIVNERGFIPANKQQRTNVSHIFAIGDI
CGDPMLAHKATNEAKVAAEVIAGHKVEFDAMTIPSVAYTDPEIAWMGLTETEAKAKGIPF
EKANFPWAASGRALAMGRDDGMTKLLWDPSTKRIIGAGIVGVNAGELLAETVLAMEMGAD
LEDLALTIHAHPTLSETPMFAAEMGLGTITDLFIPKKK
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggttgaagtcaaggtcccggatatcggcgacgtcaaggaagtggaagtcatc
gaactgatggtcaaggtaggcgataccgtcaaggtcgaccagtcgttgatcaccgtcgaa
tcggacaaggccagcatggaaattccgtcgagccaggccggcgtcatcaaggaaatcaag
gtcaaggtaggcgacaaggtcagcgaaggttcgctgatcctggtggtggaagccgccggc
gccgccgcggcagctccggcagcggcagctccggcgccggcagcaaccgctgcgccagcg
gccgccgcagccccggccgccgccggcgttgccagcaccatcgaaatcaaagtgccggat
atcggcgacgtcaaggaagtcgatgtcatcgagctgatggtcaaggtaggcgacagcgtc
aaggtcgaccagtcgctgatcaccgtcgaatcggacaaggccagcatggaaattccttcc
agccaggccggcgtcatcaaggaagtgaaagtcaaggtaggcgacaaggtcagcgaaggt
tcggtgatcgtgctgctggaaaccaccggcgccgctgcagccgcaccggctggcgcagct
cctgctccggcagctgcgccagcagcgccagccgtggcggctccggcggccgtccgtttc
gccggcaaggtcgacatcgaatgcgacaccatggtgctgggcgccggccccggcggctat
accgctgccttccgcgctgccgacctcggccaaagcgtggtgatgatcgagcgctaccca
agcctcggcggggtttgcctgaacgtcggctgtatcccgtccaaggcgctgctgcatgcg
gccaaggtgattaccgaagcggaagaaatggcgcatttcggcgtcaagatgtcggcgccg
gaaatcgatatcgacgccttgcgcggctggaaggaaagcgtcatcaagaaactgaccggc
ggtttgtccggcctgtccaaggcgcgcaaagtgcaggtgctgaccggcaagggcgaattc
agctcggccaatacgattacggtagccactgccgacggcccgaaagtggtcggcttcaag
aacgcgatcattgccgccggttcctcggtggcccgcattcctggcttcccttacgacgat
ccgcgcctgatcgactccaccggcgcgctggagctgcgccagattccgaagaaactgctg
gtcatcggcggcggcatcatcggcctcgaaatggcttgcgtgtatgacgcgctcggctcc
aaggtcacggtggtcgaatttgccgacggcctgattcctgcggccgaccgcgacattgtc
aagccgctgcagaaacgcatcgaaaaacgctacgaagcgatttacctgaaaaccaaggtg
accaagctggaagctctgaaagaaggtctgcgcgcaacgtttgaaggcgccgacagcagc
tctcccgcggcgccggaaccgcaactgtacgacatggtgctggtggcggtggggcgtcgt
cctaacggcaaggacatcgccgccgagaaggccggcgtgatcgtcaacgagcgcggtttc
atcccggccaacaagcagcagcgcaccaacgtctcgcacatcttcgccatcggcgatatc
tgcggcgatccgatgctggcccacaaagccaccaacgaagccaaggtggccgccgaagtg
atcgccggccacaaggtcgagttcgacgccatgacgattccttcggtggcctacactgat
ccggaaatcgcgtggatgggtttgactgaaaccgaagccaaggccaagggtattcctttc
gaaaaagccaatttcccgtgggcggcaagcggccgtgcgctggcgatggggcgcgacgac
ggcatgaccaagctgttgtgggatcctagcaccaagcgcatcatcggcgccggcattgtc
ggcgtgaatgccggcgagctgctggcggaaaccgtgctggcgatggaaatgggcgccgac
ctggaagatctggcgctgaccatccatgcgcatccgaccttgtcggagacgccgatgttt
gcggcggagatgggcctgggtacgattactgacctgttcattccaaagaaaaaataa
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