Collimonas fungivorans: CFU_3756
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Entry
CFU_3756 CDS
T01583
Name
(GenBank) topoisomerase type IIAa
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cfu
Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfu03032
]
CFU_3756
03400 DNA repair and recombination proteins [BR:
cfu03400
]
CFU_3756
Enzymes [BR:
cfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CFU_3756
DNA replication proteins [BR:
cfu03032
]
Prokaryotic type
DNA Topoisomerases
CFU_3756
DNA repair and recombination proteins [BR:
cfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFU_3756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
AEK63580
UniProt:
G0ADN8
LinkDB
All DBs
Position
complement(4416515..4419181)
Genome browser
AA seq
888 aa
AA seq
DB search
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHEMNNVWN
RPFVKCARVVGETMGKYHPHGDASIYDTLVRMAQPFSLRYMLVDGQGNFGSIDGDGAAAM
RYTECRLDKIAGELLADLDKETVDFVPNYDGKEKEPSVLPTRIPNLLINGSSGIAVGMAT
NIPPHNLTEVIDGALHVLRNADCTIDELIEIIPAPDFPTAGIIYGVSGVRDGYRTGRGRV
VMRAKTHFEEFGREGRTAIIIDELPYQVNKKALLERIAELVRDKKLEGISDLRDESDKSG
MRVVIELKRGEVAEVVLNNLYKQTQLQDTFGMNMVALVDGQPKLLNLKQMLECFLSHRRE
VVTRRTVFELRKARERGHVLEGLAVALANIDDFIALIKAAPTPPVAKSELMARAWDSSMV
REMLARTGEENLGGVEAFRPENLPKHYGIQADGMYRLSDDQAQEILQMRLQRLTGLEQDK
IVNEYKEVMAQIADLLDILAKPERVTVIITDEMTAAKNEYGIGNKDERRSQIEHNPTDLG
TEDLITPQDMVVTLSHTGYMKAQPVSEYRAQKRGGRGKQAMATKEDDWIDQLFVGNTHDY
ILCFSNRGRLYWLKIWEVPQGSRNSRGKPIVNMFPLQDGEKITVVLPLSGANRSFPEDRY
VFMSTSLGTVKKTPLSDFSNPRKAGIIAVDLDEGDFLIGAALTDGQHDVMLFSDSGKAVR
FDENDVRPMGRTARGVRGMNLEEGQQVIALLVAENEQQSVLTATENGFGKRTPITEYTRH
GRGTKGMIAIQTSERNGKVVAATLVEPSDEIILITTGGVLIRTRVAEIREMGRATQGVTL
IAVEDGTKLSGLQRVVESDAEVDAEVEASAEGDTGSTAAGDASEPAAE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgctaaagaaacaatcccaatttccctcgaagaagaaatgcgcaagagc
tatctcgattacgcgatgagcgtgatcgtcggccgtgcgctgccggatgtgcgtgacggc
ctcaagccggtgcatcgccgggtcttgttcgcgatgcatgaaatgaacaacgtctggaac
cgcccgttcgtgaagtgcgcgcgcgtggtcggtgagaccatgggtaaataccacccgcac
ggcgacgcgtcgatctacgacacgctggtgcgcatggcgcagccgttctcgctgcgctac
atgctggtcgacggccagggcaacttcggttcgatcgatggcgacggcgcggcagcgatg
cgttacaccgagtgccgcctggacaagatcgccggcgaattgctggccgacctcgacaag
gaaactgtcgacttcgtgcctaactacgacggcaaggaaaaagaaccgtcggtgctgccg
acgcgcatccccaacctgctgatcaacggctcgtccggcatcgcggtcggcatggcgacc
aacatcccgccgcacaacctgaccgaagtcatcgacggcgcgctgcatgtgctgcgcaac
gccgattgcaccatcgatgaactgatcgaaatcatcccggcgccggatttcccgaccgcc
ggcatcatctacggcgtgtccggcgtgcgcgacggttaccgcaccggccgcggccgtgtg
gtgatgcgcgccaagacccatttcgaagagttcggccgcgaaggccgcaccgcgatcatc
atcgacgagctgccgtaccaggtaaacaagaaggccttgctggaacgcatcgccgaactg
gtgcgcgacaagaagctggaaggcatttccgatctgcgcgacgagtcggacaagtccggc
atgcgcgtggtgatcgagctcaagcgcggcgaagtggccgaggtggtgctgaacaatctg
tacaagcagacccagctgcaggataccttcggcatgaacatggtggccctggtcgacggc
cagccgaaactgctgaacctgaagcagatgctggaatgtttcctgtcgcaccgccgtgaa
gtcgtcacacgccgcaccgtgttcgaactgcgcaaggcgcgcgaacgcggccacgtgctg
gaaggcctggcggtagcgctggcgaatatcgacgatttcattgccctgatcaaggctgcg
ccgacgccgccggtagcgaaatccgaactgatggcgcgcgcctgggattcctccatggtg
cgcgaaatgctggcccgcaccggcgaggaaaacctcggcggcgtggaagccttccgtccg
gaaaacctgcccaagcattacggcatccaggccgacggcatgtatcgcctgtcggacgac
caggcgcaggaaatcctgcagatgcgtctgcaacgcctgaccggcctcgagcaagacaag
atcgtcaacgagtacaaagaagtgatggcgcagatcgccgacttgctggatatcctggcc
aagccggaacgcgtcaccgtcatcatcaccgacgagatgactgccgccaagaacgaatac
ggcatcggcaacaaggatgagcgccgttcgcagatcgagcacaatcctaccgatctcggc
acggaagacttgatcacgccgcaagacatggtggtgaccttgtcgcacaccggctacatg
aaagcgcagccggtctctgagtaccgcgcacaaaaacgcggtggccgcggcaagcaagcg
atggcgaccaaggaagacgactggatcgaccaactgttcgtcggcaatacccatgactac
atcttgtgcttcagcaaccgcggccgtctgtactggctgaagatctgggaagtgccgcaa
ggttcgcgcaattcgcgcggcaagccgatcgtcaacatgttcccgctgcaggatggcgag
aagatcactgtggtgctgccgttgtcgggcgccaaccgcagtttccctgaagaccgttat
gtcttcatgtcgaccagcttgggcaccgtcaagaaaacgccgttgtccgatttcagcaat
ccacgcaaggccggcatcatcgcggtcgacctggatgaaggcgatttcctgatcggcgct
gcgctgaccgacggccagcacgacgtcatgctgttctccgattccggcaaggcagtgcgc
ttcgatgaaaacgatgtgcgtccgatgggccgtaccgcgcgcggcgtgcgcggcatgaac
ctggaagaaggccagcaggtcatcgccttgctggttgcggaaaatgaacagcaatcggtg
ttgaccgcgactgaaaacggtttcggcaaacgtactccgatcaccgagtacacgcgccac
ggccgcggcaccaagggcatgatcgcgatccagaccagcgagcgcaacggcaaggtggtg
gcggcaacgctggtggaacctagcgatgaaatcatcttgatcaccaccggcggcgtcctg
atacgcacccgcgtcgcggaaatccgcgaaatgggccgcgctacccagggcgtgacgctg
atcgcggtggaagacggcaccaagctgagcggtttgcagcgcgtggtcgaatccgacgcc
gaggtcgatgctgaagtggaagccagtgctgaaggcgataccggcagcacggcagccggc
gacgcttccgagccagcagcggagtaa
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