KEGG   Collimonas fungivorans: CFU_3878
Entry
CFU_3878          CDS       T01583                                 
Symbol
nrdA
Name
(GenBank) Ribonucleotide reductase of class Ia (aerobic), alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
cfu  Collimonas fungivorans
Pathway
cfu00230  Purine metabolism
cfu00240  Pyrimidine metabolism
cfu01100  Metabolic pathways
cfu01232  Nucleotide metabolism
Module
cfu_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
cfu_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:cfu00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    CFU_3878 (nrdA)
   00240 Pyrimidine metabolism
    CFU_3878 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfu03400]
    CFU_3878 (nrdA)
Enzymes [BR:cfu01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     CFU_3878 (nrdA)
DNA repair and recombination proteins [BR:cfu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    CFU_3878 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC ATP-cone Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: AEK63702
UniProt: G0ADS9
LinkDB
Position
complement(4556784..4559708)
AA seq 974 aa
MQSTQEISVKSSADIAGVQPSTGSGSPVKVSSSFGDYRIIRRNGAVVGFEPSKISIAVTK
AFLAVNGGQGAASARVRELVEQLTSNVVAALVRRQPNGGTFHIEDIQDQVELSLMRSGEH
DVARAYVLYRAKRMEERSQQQTGAKPTVAGTELFVTEDGQRRVLDMEQVRSLITAACIGL
EKHVDAEAILAETVKNLYDGVPVEELHKSAILAARALMEKDPAYSTVTARLLMHTIRKEV
FGKEVAQADAPEAYLEYFPKFIKKGIEADLLDAKLAQFDLKALGEALKPERDLQFGYLGL
QTLYDRYFLHVREIRIEMPQAFYMRVAMGLALNEVNREARAIEFYNLLSSFDFMSSTPTL
FNSGTQRSQLSSCYLTTVADDLDGIYEAIKENALLAKYAGGLGNDWTPVRSLGAHIKGTN
GKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFLDLRKNTGDDRRRTHD
MNTANWIPDLFMKRVMEKGEWTLFSPSDAPDLHDKVGKAFEEAYTGYEARAARGDLRLFK
KIQALDLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGMVHSSNLCTEITLNTNESEIA
VCNLGSVNLPAHMKDGQLDHAKLQKTINTAMRMLDNVIDINYYAVKKARDSNLRHRPVGL
GIMGFQDCLHMMRVPYASQAAVEFADKSMEAVCYHAYWASTELAEERGRYSSYRGSLWDR
GILPQDSLKLLAEERGGYLEADMSASLDWTELRGRIKEFGMRNSNCVAIAPTATISNIIG
VSACIEPTYQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMISDLKYFDGSLAKIDRI
PQDLRDIYATAFEVEPSWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDETYKLAWLRGL
KTTYYLRTIGATHTEKSTSKTGALNAVSVDGGASGGAAATYGTAAVAAAPQELDGPACTM
RPGDPGFEECEACQ
NT seq 2925 nt   +upstreamnt  +downstreamnt
gtgcaatctactcaagaaatttccgttaaatcatcagccgacatcgctggtgttcagcca
tccaccggcagcggctctcccgtcaaggtatccagcagtttcggcgactaccgaatcatc
cgccgcaatggcgccgtagtcggttttgaaccgtccaagatctcgatcgccgtcaccaag
gcattcctcgccgtcaacggcggccagggtgcggcatcggcacgggtgcgagagctggtc
gaacagctgacttcgaacgtcgtcgccgcgctggtgcgccgccagccgaatggcggcact
ttccatattgaagacatccaggaccaggtcgaactgtccctgatgcgctccggcgagcac
gacgtggcgcgtgcctacgtgctgtaccgcgccaagcgcatggaagagcgttcacagcag
cagaccggcgccaagccgaccgtagccggcaccgaattgttcgtgaccgaagacggccag
cggcgtgtgctcgacatggaacaggtgcgcagcctgattaccgccgcgtgcatcggcctg
gaaaaacatgtcgacgctgaagccatcctggccgagaccgtcaagaacctgtacgacggc
gtgccggtcgaagaactgcacaagtcggcgatcctggcggcgcgtgcgctgatggaaaaa
gaccctgcctacagcacggttactgcgcgcctgctgatgcacacgatccgcaaggaagtg
ttcggcaaggaagtggcgcaagccgatgcgccggaggcataccttgaatatttcccgaaa
tttattaaaaagggtattgaagccgacttgctggatgccaagctggcgcaattcgacctg
aaagcactgggcgaagcattgaagccggagcgtgacctgcaattcggttacctcggcctg
caaaccctgtacgatcgttatttcctgcatgtccgcgagatccgcatcgaaatgccgcaa
gcgttctacatgcgggtagcgatgggcctggcgctgaatgaagtgaaccgcgaagcgcgc
gccatcgagttctacaacctgctgtccagcttcgatttcatgagctcgacgccgaccctg
ttcaactcgggcacgcaacgctcgcagctgtcgtcctgctacctgaccaccgtggccgac
gatctcgacggcatctacgaagcgatcaaggaaaacgccttgctggccaaatatgcaggc
ggcctgggcaacgactggacgccggtgcgttcgctgggcgcccatatcaagggcaccaac
ggcaagtcgcaaggcgtggtgccgttcctgaaagtggtcaacgataccgccgtcgcggtc
aaccagggcggcaagcgcaaaggcgcggtctgcgcctacctggaaacctggcacatggac
atcgaggaattcctcgatctgcgcaaaaataccggcgacgaccgccgccgcacccacgac
atgaacaccgccaactggattccggacctgttcatgaagcgcgtcatggaaaagggcgag
tggaccctgttctcgccaagcgatgcgccggacctgcacgacaaggtcggcaaggccttc
gaggaagcgtataccggctacgaagcccgggccgcccgcggcgacctgcgcctgttcaag
aagatccaggcgctggacctgtggcgcaagatgctgtcgatgctgtttgaaaccggccat
ccatggatcaccttcaaggacccatgcaacatccgttcgccgcagcagcacgtcggcatg
gtccacagctccaacctgtgcaccgagatcacgctcaacaccaacgaatccgagatcgcc
gtgtgcaacctgggctcggtcaacctgccggcccacatgaaagacggccagctggaccac
gccaagttgcagaaaaccatcaatactgcgatgcgcatgctggataatgtgatcgatatt
aactattatgcagtgaagaaggcgcgcgattccaacctgcggcaccgtccggttggcctc
ggcatcatgggtttccaggattgcctgcacatgatgcgcgtgccttacgcctcgcaagca
gcggttgaatttgccgacaagtcgatggaagcggtctgctaccacgcctactgggcgtcg
accgaactggcggaagagcgcggccgctacagcagctatcgcggttccctgtgggaccgc
ggcatcctgccgcaggattccctgaaactgctggcggaagagcgcggcggttatctcgag
gcggacatgtccgcttcgctggactggaccgaactgcgcggccgcatcaaggaattcggc
atgcgcaattcgaattgcgtggcgattgcgccgactgcgactatctcgaacattattggc
gtatcggcttgcatcgagccgacctaccagaacctgtacgtgaaatcgaacctgtcgggc
gaattcaccgaaatcaatgaatacctggtgcgcgacctgaaagcgcgcggcttgtgggac
gaagtgatgatctccgacctcaagtacttcgacggcagcctggccaagatcgaccgcatt
ccgcaagacctgcgcgacatctacgccaccgcattcgaagtcgagccgtcctggctggtg
gaagcggcgtcgcgtcgccagaaatggatagaccaggcacagtcgctgaatatctacatg
gcgggcgcatccggcaagaagctggatgaaacctacaagctggcatggctgcgtggcctg
aagaccacttattacctgcgcaccatcggcgcgacgcataccgagaagtcgacatcgaag
accggcgccctgaacgccgtgtcggtagatggcggcgccagcggcggtgcggcagcgaca
tatggcactgccgctgttgcagccgcgccacaggaactggatggcccggcgtgcaccatg
cgtcccggcgatccaggattcgaagagtgcgaagcttgccagtaa

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