Collimonas fungivorans: CFU_3944
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Entry
CFU_3944 CDS
T01583
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00470
D-Amino acid metabolism
cfu00550
Peptidoglycan biosynthesis
cfu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CFU_3944 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CFU_3944 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfu01011
]
CFU_3944 (murD)
Enzymes [BR:
cfu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CFU_3944 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cfu01011
]
Precursor biosynthesis
Amino acid ligase
CFU_3944 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AEK63767
UniProt:
G0AF40
LinkDB
All DBs
Position
complement(4627709..4629235)
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AA seq
508 aa
AA seq
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MDYTGKHVLVLGLGESGLASALWLAHCGATLRVADTRSAPERLPLLQQAIPAVEFVASGA
EGGFAVSLLDGIDFAVTSPGLAPTGELKEILSAATDRNIPVWGEIEVFAQALAALRESRS
YTPKVIAITGTNGKTTVTSLTGLLCERAGLTVQVAGNISPAALDVLRNALEKDALPQVWV
LELSSFQLHATCNLHADAATILNITQDHLDWHGDMESYVADKARIFSADTVRVLNRDDPL
TMQFNNGNSISFGFDEPLDGDCFGLVSDNGMQWLSVAVPGDEEERVEKRRSKKEQLALLP
VSVKRLMPADALRIRGRHNAANALAALALCRAIDLPFAPLLHGLREYHGEPHRVELVTTI
GGVEYYDDSKGTNVGATVAALNGLGRGCDGDGNASRLLLIAGGEGKGQDFSPLAAPLATY
GRALLLIGRDAPVIRAAVEKQAAGVAMVDCATLEEAVTRAAELAYAGDAVLLSPACASFD
MFRNYAHRAQVFVDAVRELALSRGEVGL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggactacacgggtaaacatgttctggtattagggctcggagaatcgggcctggcatcc
gcattgtggctggcgcactgcggtgcgacgctgcgcgtggcggatacccgcagcgcaccg
gaacgcctgccgctgctgcaacaggcaattccggcggtggagttcgtcgcctccggcgcg
gaaggcggttttgccgtcagcctgctggacggcatcgacttcgctgtcaccagcccgggc
ctggcgcctaccggcgagctgaaggaaatcctgtcggcggcgactgaccgcaacatcccg
gtatggggtgaaatcgaagtatttgcgcaagccctggcggcattgcgcgagagccgctcg
tatacgccgaaggtgattgccatcaccggcaccaacggcaagaccacggtcaccagcctg
accggcctgttgtgcgagcgcgccggcctgacggtgcaggtggccggcaatatcagcccg
gcggcgctggatgtgctgcgcaacgcgctggaaaaagacgctttgccgcaggtctgggtg
ctggagctgtccagtttccagctgcatgcaacctgcaacctgcacgccgatgccgcaacc
atcctgaacatcacccaggaccacctggactggcatggcgacatggaatcctatgtggcc
gacaaggcgcgcattttcagcgccgatacggtgcgggtgctgaatcgcgacgatccgttg
acgatgcagttcaacaacggcaacagcatcagtttcggtttcgacgaaccgctggacggc
gactgcttcggcctggtcagcgacaacggcatgcaatggctgtcggtggcggtgccgggc
gatgaagaggaacgggtcgaaaagcggcgcagcaagaaggaacaactggccttgctgccg
gtttcagtaaaacgcctgatgccggccgacgcactgcggatccgcggccgtcacaacgcc
gccaacgcgctggcggcactggccttgtgccgcgccatcgacctgccttttgcgccgctg
ctgcacggcttgcgcgagtatcacggcgagccgcaccgggtcgaactggtgacgacgatc
ggcggcgtcgaatattacgacgacagcaagggcaccaacgttggcgccacggtggcggcc
ttgaacggcctgggacgcggctgcgacggcgatggtaacgcgagtcgcctgctgctgatc
gccggcggcgaaggcaagggacaggatttttccccgctggcggcgccgctggccacttat
ggccgggcattgctgctgatcggccgcgatgcgccggtgatccgcgccgcggtcgaaaaa
caggccgccggcgtcgccatggtcgattgcgccacgctggaagaggcagtgacgcgcgcc
gccgaactggcgtatgcgggcgatgcggtattgttgtcgccggcttgcgccagtttcgac
atgttccgcaattacgcccatcgcgcgcaggtattcgtcgatgccgtacgtgagctggct
ttgtcgcgcggcgaggttgggctatga
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