Collimonas fungivorans: CFU_3946
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Entry
CFU_3946 CDS
T01583
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00300
Lysine biosynthesis
cfu00550
Peptidoglycan biosynthesis
cfu01100
Metabolic pathways
cfu01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CFU_3946 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CFU_3946 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CFU_3946 (murF)
Enzymes [BR:
cfu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
CFU_3946 (murF)
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AEK63769
UniProt:
G0AF42
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All DBs
Position
complement(4630427..4631845)
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AA seq
472 aa
AA seq
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MNVSLSQLQAWLGLPSVGAGQDQVVVNGLCTDSRAVTPGCLFVALRGERFDAHDFLDQVI
AQGVAAVVVERTPATLTALAVPALVVNDTRVALGTIGQRWRQQFTLPLIAVTGSNGKTTV
KEMIAAILVAAFGVDKSLATRGNFNNEIGVPLTLLRLGAGHQAAVIELGMNHPGEIALLT
ALAEPTVALVNNAQREHQEFMASVAAVAEENGSVIRGLPASGIAVFPADDPFTGLWRGYA
ADKAGSISFGLTADADVSCSYTGAAHGFGSDLIVTFATAGGPQIFALQLAAAGEHNVRNA
LAAIACTLAIGIDVAAIKRGLETFAPVSGRLQRKLATAAGCAGALVIDDTYNANPDSVRA
AIDVLAQSAAPRLLVLGDMGEVGNEGREFHQEIGAYAQQRGITQLFTLGDLAADASAAFG
PQAQHFNDIAALLAALDATMTPDTTVLIKGSRFMKMERAVQHLAGTTSEGTH
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtctcattgtcgcaattgcaagcgtggctgggactgccttcggttggcgccggc
caggaccaggtcgtggtcaacggcttgtgcacggacagccgcgcagtaacgccgggctgc
ctgtttgtcgccttgcgcggcgagcgtttcgacgcccatgatttcctggaccaggtgatc
gcccaaggcgtagccgcggtggtggtggagcgcacaccggctacattgaccgcgctggca
gtgccggcgctggtggtgaacgacactcgagttgcactcggtacgatagggcagcgctgg
cggcagcaattcacgctgccgctaattgcggtcaccggcagcaacggcaagactaccgtc
aaggaaatgatcgccgcgatcctggtcgcggcttttggcgtggacaagtcgctggcgacg
cgcggcaatttcaataacgagatcggcgtgccgctgaccttgctgcggctgggcgccggc
caccaggctgcagtgatcgagctcggcatgaaccatcccggcgaaatcgcgctgctgaca
gcgctggccgagccgaccgtggcgctggtcaacaacgcccagcgcgagcaccaggaattc
atggccagcgtcgccgcggtcgctgaagaaaacggcagcgtgatacgcggcttgccggcc
agcggcatcgcggtgttcccggcagatgatccgtttaccggcctgtggcgcggttatgcc
gccgacaaggctggcagcatcagtttcggcctgaccgccgacgccgatgtcagctgcagc
tacaccggcgcggcgcatggtttcggcagcgacctgatcgttaccttcgccaccgcgggc
ggtccgcagatattcgctttacagctggccgccgccggcgaacacaatgtgcgcaacgcg
cttgccgccatcgcctgcaccctggcgatcggcatcgacgtcgccgcgatcaagcgcggc
ctggaaacctttgcaccggtcagcggccgcctgcagcgcaaactggcgacagccgccggt
tgcgccggcgcgctggtgatcgacgacacctacaacgccaatccggattcggtgcgggcc
gccatcgacgtgctggcgcaatcggccgcgccgcgtttgctggtgctgggcgacatgggc
gaagtcggcaacgaaggacgcgaattccatcaggaaatcggcgcttatgcgcagcagcgc
ggcattacccaactgttcaccctgggcgacctggcggcagacgccagcgccgccttcggc
ccgcaggcacaacactttaacgacatcgcagcgttgctagccgcgctcgatgcgaccatg
acgccggacaccacggtgctgatcaaagggtcgcgcttcatgaaaatggagcgtgctgtc
cagcatctggccggtacaacatctgaggggactcactaa
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