Collimonas fungivorans: CFU_3992
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Entry
CFU_3992 CDS
T01583
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00061
Fatty acid biosynthesis
cfu00071
Fatty acid degradation
cfu01100
Metabolic pathways
cfu01212
Fatty acid metabolism
cfu02024
Quorum sensing
cfu04146
Peroxisome
Module
cfu_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CFU_3992 (fadD)
00071 Fatty acid degradation
CFU_3992 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CFU_3992 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFU_3992 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cfu01004
]
CFU_3992 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfu04147
]
CFU_3992 (fadD)
Enzymes [BR:
cfu01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CFU_3992 (fadD)
Lipid biosynthesis proteins [BR:
cfu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CFU_3992 (fadD)
Exosome [BR:
cfu04147
]
Exosomal proteins
Exosomal proteins of breast milk
CFU_3992 (fadD)
Exosomal proteins of breast cancer cells
CFU_3992 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AEK63815
UniProt:
G0AF88
LinkDB
All DBs
Position
complement(4676278..4677984)
Genome browser
AA seq
568 aa
AA seq
DB search
MDKYVDKFWLKSYPEGVAPEIDYSQYQSLAQLLEEAFQKYAPRNAYACMGKYLTYAEVDQ
LSRKVGAWLQGKGLEKGARVAIMMPNVLQYPVAIAAILRAGYIVVNVNPLYTPRELEHQL
NDSGAEAIFILENFATTLQQVIARTKVKHVVVASMGDLMGVKGLVVNLVVRHVKKMVPSF
SLPGSVPFNSVLSQGASLQLKPVALTPDDTAFLQYTGGTTGVSKGATLSHRNVVANVLQA
EAWLAPGLNNGPKVEQLVFVCALPLYHIFALTVCGMLGMREGALNLLVPNPRDIAGLIKE
MSKYQINTFPAVNTLYNALLNHPDFAKLDFSGYRVCVGGGMAVQKAVADKWKEVTGCPII
EGYGLSETSPIACANPCDIKEYSGTIGLPLPSTEIAILDDAGNPVALGQAGEIAIRGPQV
MRGYWNRDDETAKVMTADGFFKSGDIGIMDERGYTKIVDRKKDMILVSGFNVYPNEVEGV
VVQHPGVLECACVGVPDEHAGEVVKIFVVRKDPSLTAEQLMAYCREQLTGYKRPKYIEFR
TDLPKTNVGKILRRELRDEKPAEQKQAA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgtggataaattttggctcaaatcgtatccggaaggcgtggccccggag
attgactactcccaataccagtcgctggcgcagttgctggaagaggcgttccagaaatac
gcgccgcgcaacgcctatgcctgcatgggcaaatacctgacgtatgccgaggttgaccag
ctgtcccgcaaagtcggcgcctggctgcagggcaaaggcctggaaaagggcgcgcgagtc
gccatcatgatgcctaacgtgctgcaatatccggtggcgatcgccgccatcttgcgtgcc
ggttatatcgtggtcaacgtcaatccgctgtacaccccgcgcgagcttgagcatcagctg
aacgactcgggcgcggaagccatcttcatactcgaaaatttcgccactaccctgcagcag
gtcatcgcccgcaccaaggtcaagcatgtggtggtcgccagcatgggcgatctgatgggc
gtcaaaggcctggtggtcaacctggtggtgcgccatgtcaagaagatggtgccgagtttc
tccttgcccggttccgtgccgttcaacagtgtcttgtcgcaaggggcctcgctgcagctg
aaaccggttgcgctgacgcccgacgacaccgctttcctgcaatacacaggcggcactacc
ggcgtctcgaaaggggcaactctgtcgcatcgcaacgtggtggccaacgtgctgcaggct
gaagcctggctcgctcccggcttgaacaacggcccgaaagtcgagcagctggtgtttgtc
tgcgccttgccgctgtatcacatcttcgccttgacggtatgcggcatgctcggcatgcgc
gagggcgccttgaacctgctggtcccgaatccgcgcgacatcgccggcctgatcaaggaa
atgtcgaagtaccagatcaataccttcccggcggtcaatacgctgtacaacgccttgctg
aaccatcccgatttcgccaagctggatttctccggctaccgggtctgcgtcggcggcggc
atggcggtgcaaaaggcggttgcggacaagtggaaagaagtcaccggctgcccgatcatc
gaaggctacggcttgtcggaaacttcgcccatcgcttgcgccaatccatgcgacatcaag
gaatacagcggcaccatcggcctgcctttgccgtcgaccgagatcgccatcctggacgac
gccggcaatccggtagcactgggccaggccggcgaaatcgcgatccgcggaccgcaggtc
atgcgcggctactggaaccgcgatgacgaaaccgccaaggtcatgaccgctgacggcttt
ttcaagtcgggcgatatcggcatcatggatgagcgcggttacaccaagatcgtcgaccgc
aagaaagacatgatcctggtctccggtttcaatgtctatccgaacgaagtcgaaggcgtg
gtggtgcagcatccgggcgtgctggaatgcgcatgcgtcggtgtgccggacgaacatgcc
ggcgaagtggtgaagatttttgtggtgcgcaaggatccgtcgctgaccgccgagcaactg
atggcttattgccgtgagcagctgaccggctacaagcggccgaaatatatcgagttccgc
accgacctgccgaagaccaacgtcggcaagatcctgcgccgcgaattgcgcgacgagaaa
ccggctgagcaaaaacaggcggcctga
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