Collimonas fungivorans: CFU_4033
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Entry
CFU_4033 CDS
T01583
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cfu
Collimonas fungivorans
Pathway
cfu00300
Lysine biosynthesis
cfu00470
D-Amino acid metabolism
cfu01100
Metabolic pathways
cfu01110
Biosynthesis of secondary metabolites
cfu01120
Microbial metabolism in diverse environments
cfu01230
Biosynthesis of amino acids
Module
cfu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CFU_4033 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CFU_4033 (dapF)
Enzymes [BR:
cfu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CFU_4033 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AEK63855
UniProt:
G0AE06
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Position
4728840..4729703
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AA seq
287 aa
AA seq
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MKLKFTKMHGAGNDFVVIDAIHQHVDFTPAQWQRLGDRRFGVGADQMLVVEKSQAEGVDF
RYRIYNADGGEVEQCGNGARAFVKFVTDKGLTSKRAIRVETMSGIIEPKLEDDGRITVAM
GAPVLAPAAVPFDASNLDSRAMGEDTLWPLDVQGKQVWISVVSMGNPHAVQVVEDSEAAP
VLAEGPLIEHHPRFPRRVNAGFMQIVDRHSIKLRVFERGAGETLACGTGACAAVVAGIRR
GLLDSPVAVQTHGGELSIAWAGGQQAVMMTGPAVSVFEGEIEIAAAG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaattcacaaaaatgcacggcgccggcaatgatttcgtcgtgatcgacgcg
atccaccagcatgtcgatttcactcctgcgcagtggcagcgcctgggcgaccgccgcttt
ggcgtgggcgcggatcaaatgctggtggtggaaaaatcgcaggcggaaggcgtcgatttc
cgctaccggatttacaacgccgacggcggcgaggttgaacaatgcggcaacggcgctcgc
gccttcgtcaaattcgtcactgacaagggtctcaccagcaagcgcgcgatccgggtggaa
accatgtccggcatcatcgaaccgaagctggaagacgacggccgcattacggtcgccatg
ggcgcgccggtcctggcgcccgccgcggtgccgttcgacgccagcaacctggatagccgg
gcgatgggcgaagatacgctctggccgctggatgtccagggcaaacaggtatggatctca
gtagtatcgatgggcaacccgcatgcggtgcaggtagtcgaggacagcgaggcggcgccg
gtgctggccgaaggtccgctgatagaacatcatccgcgctttccgcggcgggtcaatgcc
ggcttcatgcagattgtcgatcgccacagcatcaagctgcgcgtattcgagcgcggcgcc
ggcgaaaccctggcttgcggcaccggcgcttgcgctgcggtggttgccggcatccggcgc
ggcctgctggactcgccggtcgcggtgcagacccatggcggcgaactgtcgatcgcctgg
gccggcggacagcaggcggtcatgatgaccggcccggcggtatctgtattcgagggcgaa
atcgaaatcgccgcggccggttaa
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