Choristoneura fumiferana (eastern spruce budworm): 141426203
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Entry
141426203 CDS
T11020
Symbol
SoxN
Name
(RefSeq) SRY-box transcription factor soxNeuro
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfum03000
]
141426203 (SoxN)
Transcription factors [BR:
cfum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
141426203 (SoxN)
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
141426203
NCBI-ProteinID:
XP_073941157
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Position
3:7388810..7390636
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AA seq
355 aa
AA seq
DB search
MLTMETDLKGGSLHATVPPHHGLQHGYGSLGALGGMMLPQQSTMQHQHHQLPQHLPHHQP
PPPHHTPHTPTNNNNNNTSKNSNSDRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKR
LGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLAKKQEKYPLGGGALM
GAGEARAATAPAQQPRDMYQMTPNGYMPNGYMMHDPGAYQQQAYGYPRYEVSQMQQGGYG
GGYYGGQGSPYLPQPPSPAGYALGPGSPGYAMPPSCASHSPSGSSAKSEPLSPGPPAMKR
EFPHEAPLKREFAHAHHDMGMKREYGQQDLSHIINMYHVPDEQRYAANERAMPLI
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgatggagacggatttgaagggcggcagcctgcacgcgactgtgccgccgcac
cacgggctgcagcacggctacggctcgctgggcgcgctcggcggcatgatgctgccgcag
cagtccaccatgcagcaccagcaccatcagctgccgcagcacctgccgcaccatcagccg
ccgccgccgcaccacacgccgcacacgcccaccaacaacaacaacaacaacaccagcaaa
aactccaactcggatcgcgtcaagcgccccatgaacgcattcatggtgtggtcgcgcggc
caacgtcggaagatggcctccgacaacccaaaaatgcacaactctgaaatatcaaaacgt
ctcggtgcccagtggaaagatctctcagaatctgagaaacgaccgttcatagacgaggcg
aagagacttcgcgcggttcacatgaaggaacacccggattacaaatacaggccgcggagg
aagacgaagactctggccaagaaacaagagaaataccccctcggagggggcgcgcttatg
ggcgcgggcgaggcacgcgcggcgacggcgccggcgcagcagcctcgcgacatgtaccag
atgacgcccaatggatacatgcccaacgggtacatgatgcacgacccgggcgcctaccag
cagcaggcgtacggctacccgcgctacgaagtgtcgcagatgcagcagggcgggtacggc
ggcgggtactacggcgggcagggctcgccgtacctgccgcagccgccgtcgccggccggc
tacgcgctgggccccggctcgccgggctacgcgatgccgccgtcgtgcgcatcgcactcg
cccagcggctcgtccgccaagtcggagccgctgtcgccgggcccgcccgccatgaagcgc
gagttcccgcacgaggccccgctgaagcgcgagttcgcgcacgcgcaccacgacatgggc
atgaagcgcgagtacggccagcaagacctcagccacatcatcaacatgtaccacgtgccc
gacgagcagcggtacgcggccaacgagcgcgccatgccgctcatctga
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