Choristoneura fumiferana (eastern spruce budworm): 141426418
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Entry
141426418 CDS
T11020
Symbol
shi
Name
(RefSeq) dynamin-1 shibire isoform X1
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04144
Endocytosis
cfum05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141426418 (shi)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
141426418 (shi)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141426418 (shi)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cfum04147
]
141426418 (shi)
Enzymes [BR:
cfum01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
141426418 (shi)
Membrane trafficking [BR:
cfum04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
141426418 (shi)
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
141426418 (shi)
RhoA-dependent endocytosis
141426418 (shi)
Exosome [BR:
cfum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141426418 (shi)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
PH
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
141426418
NCBI-ProteinID:
XP_073941406
LinkDB
All DBs
Position
Z:9373366..9406279
Genome browser
AA seq
867 aa
AA seq
DB search
MSGNMGMEQLIPIVNKLQDAFTQLGVHMQLDLPQIAVVGGQSAGKSSVLENFVGRDFLPR
GSGIVTRRPLILQLIQGNAEYAEFLHCKGKKFVDFNEVRAEIEAETDRITGSNKGISPVP
INLRVYSPNVLNLTLIDLPGLTKVPIGDQPADIEQQIKGMIFQFIRRESCLILAVTPANT
DLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQ
KDIDGRKDITAALAAERKFFLSHQSYRHLADRLGTPYLQRVLNQQLTNHIRDTLPGLRDK
LQKQLLTLEKDVDQYKHFRPDDPSIKTKAMLQMIQQLQTDFERTIEGSGSAQINTIELSG
GAKINRLFHERFPFEIVKMEFDEKELRREIAFAIRNIHGIRVGLFTPDMAFEAIVKKQIG
RLKEPCLKCVDLVVQELSNVVRVCTERMSRYPRLREETERIIMSHVRSRENQCKDQLVLL
IDCELAYMNTNHEDFIGFAKSYARSGLNSENVSSGAQNQSENSTKSGHRALGNQVIRKGY
MCIHNLGIMKGGSRDYWFVLTSESISWYKDEEEREKKYMLPLDGLKLRDLEQGFMSRRHM
FALFNPEGRNVYKDYKQLELSCETQDDVDSWKASFLRAGVYPEKTSEAANGDELFPFPGL
GGSKKSSDSAGSSSMDPQLERQVETIRNLVDSYMRIVTKTTRDLVPKTIMMMIINNAKDF
INGELLAHLYASGDQSQMMEESPEEALKREEMLRMYHACKEALHIIGDVSMATVSTPVPP
PVKNDWLESRLDSNPRLSPPSPGGPRRANPTQQSAMGQRGAPPPPGAGTGRPAPPLPSRP
GGAAPMPPGGRPQPGAGLPAPLIPTRR
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaatatgggaatggagcaattgatcccaattgttaataaactacaagatgct
ttcactcagctgggtgtgcatatgcaactagatttgccacaaattgctgtggtgggcgga
cagtcagcaggaaagagttcagtattagaaaattttgttggcagggacttcttgcctcgc
ggctcaggaatagtaacgcgacgacctttgattctacagcttattcaaggaaatgcagaa
tatgctgagttcctgcactgcaagggcaagaagtttgtggacttcaatgaggtccgtgcc
gagatcgaggcggagacagatcgcatcacgggctccaacaaaggcatttctcctgtgccc
atcaatttacgcgtatactcacctaatgtacttaacttgacgctgatcgatctgccgggg
ctgaccaaggtgcccattggtgaccagccggcggatattgagcagcagatcaaagggatg
atcttccagttcatcaggcgcgagtcatgcttgatcctcgccgtgacgcctgccaacacg
gatctcgccaacagcgacgctctcaaacttgccaaagaggttgacccacaaggtctgcgt
accatcggcgtgatcaccaagctggatttgatggacgaaggcacggacgcgcgagacgtg
ctcgagaacaagctactgccgctgcgtcgcggctacatcggcgtcgtcaatcgctcgcag
aaggacatcgatggcagaaaggatattaccgccgctttggccgccgagaggaagttcttc
ctcagccaccaatcgtaccgccatctcgcggaccggctcggcactccgtacctgcagcga
gtgctcaatcagcagctgacgaatcacatccgcgacactttacccggtctccgcgacaag
ctgcagaaacagctgctgacccttgagaaagatgtcgaccagtacaagcatttccgcccc
gacgatccatccatcaagaccaaggctatgctgcaaatgattcagcaattgcaaaccgac
ttcgaacgcaccatcgaaggctctggttctgcccaaatcaacacgatcgagctctctgga
ggtgccaagatcaatcggttgttccacgagcggttccccttcgagattgtcaagatggag
ttcgatgagaaggaactgcgtcgcgagatcgcctttgccattcgaaacattcacggtatc
agggtgggtctgttcactcccgacatggctttcgaggcgatcgtcaagaaacagatcggc
cgtctgaaggagccgtgcctaaagtgcgtggatctcgtcgtgcaggagctttccaacgta
gtgcgcgtctgcaccgagaggatgtcacgctacccgcgcctgcgcgaagagaccgaacgc
atcatcatgtcccacgtgcgctcgcgcgagaaccaatgcaaggaccaactcgtgctcctc
atagattgcgagctcgcgtacatgaacacaaaccacgaggatttcatcggattcgccaag
tcttacgctagatctggattgaattctgaaaacgtctcttctggtgctcaaaaccagtcc
gagaactcgacgaagtcgggccaccgcgcgctcggtaaccaagttatcaggaaaggttac
atgtgtatacataacctgggaataatgaaaggaggttcccgcgattactggtttgtgctc
acgtcggagagcatctcgtggtacaaggacgaggaggagcgcgagaagaaatacatgctg
ccgctggacggactcaagttgcgcgaccttgaacaggggttcatgtcgcggcggcacatg
ttcgcgctgttcaaccccgaaggcaggaacgtctacaaggactacaaacagctggagttg
tcctgcgagacgcaagacgacgtggactcgtggaaggcttcgtttctgcgcgccggtgtc
tatcctgagaagacctccgaagcggccaacggcgacgagttatttcccttcccggggttg
ggtggaagtaagaaatcttcagactccgcgggatccagcagcatggacccacagctcgag
cgtcaagtggagaccatccgcaacttggtcgactcttacatgcgcattgtgaccaagacc
accagggacctcgtgccgaagacgatcatgatgatgatcatcaacaatgccaaagatttc
atcaacggggagctgctggcgcacctgtatgcgtccggcgatcagtcgcaaatgatggag
gaatccccggaggaagctctgaagcgcgaggagatgctccgcatgtaccacgcttgcaag
gaggcgttgcacataatcggcgatgtttccatggcgaccgtgagcacgcccgtgccgccg
ccagtcaagaacgactggctcgagagccggcttgattcaaacccgcgtttgtcgccgccc
tcacccggcgggccgcgacgagccaacccaactcagcaaagtgcgatgggccagcgaggc
gctccgccgccgccgggcgctggcacggggcgtcccgcgccgccgctgccctcgcggccc
ggcggcgccgcgcccatgccgcccggcggccgtcctcaacccggcgccggcttgcctgcc
ccgctcatacccacgcggcgctaa
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