Choristoneura fumiferana (eastern spruce budworm): 141426465
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Entry
141426465 CDS
T11020
Symbol
vari
Name
(RefSeq) MAGUK p55 subfamily member vari isoform X1
KO
K28619
MAGUK p55 subfamily member 6
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
141426465 (vari)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cfum04990
]
141426465 (vari)
Domain-containing proteins not elsewhere classified [BR:
cfum04990
]
PDZ domain-containing proteins
MAGUK family proteins
141426465 (vari)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
PDZ
SH3_2
SH3_1
PDZ_2
PDZ_6
SH3_9
L27
PDZ_Tricorn
Exo_endo_phos_2
LAGLIDADG_3
Colicin_E5
Motif
Other DBs
NCBI-GeneID:
141426465
NCBI-ProteinID:
XP_073941485
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Position
3:7963277..7985031
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AA seq
599 aa
AA seq
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MMVRRSGRYSVNWRGFKDFTLGNKPPDEEKEEPKPDDLSNHDVIFLKSIVESPDFGRKSD
PIESEEDLIVKPVSLDNVNIIRRLSEYRGNNIRTIEQAELAILLSRIHFKALIDAHDKIG
ALWLQRGSGVDEKPVVKQDKDEAVAAETSPEENGDMPVETVKVVGLRKVPGQPLGLTVTT
DEHGQLIVARIMAGSAAAKQALLSVGDVLLEVDGVQIDTEDQLKEAVSKPNDRVTLKVGP
NLKEKSSQLTNKLTCYMRALFDYNPKEDTLLPCKEIGLEFKKGDILQVSDRKDPNWWQAS
HVENSDVVGLIPSPELEERRKAYVPPEADFVHKISICGARISKKKKKFVYESRSSVQLEG
AELALYEEVARTPPFLRRVMALVGTRGVGRRTLKNRLIQDHPDRFGAVVPHTSRPPRPLE
ENGLSYWFVSREEMERDIHAGRFLEHGEHNGHLYGTHLDSIRAVIKEGKMCILDCAPQSL
KLLHNSSEFLPFVVMVAAPGIEQLRNLTFASNRNLTFDRQSSIRFSSRRARTLESLASLY
EEEDIKQTLEESARIQRQHEKYIDLVITNHNNDTTYSKIMDALHSLSTDHQWVPVSWIY
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgatggttcgacgcagcggacgctactccgtcaactggcggggattcaaagacttcacg
ctcggcaacaaaccacccgacgaagaaaaggaggaaccaaaaccagacgatttatcaaac
catgatgtaatatttttgaaaagtatagtagagagtccggattttgggcgaaaaagtgat
cccatcgaatcggaagaggacttgatcgttaaacccgtctcgttggataatgtaaacata
atacgaaggctaagcgagtatcgtggcaacaacattagaactattgagcaagcagaactc
gctatattgctatccagaatacattttaaggctttaatagatgctcatgataaaataggt
gccctctggctccagcgaggatcaggagttgatgagaagccagttgtgaagcaagacaaa
gacgaagctgtagctgctgagacaagccctgaagaaaacggagacatgccggtagaaact
gtgaaagtggttgggcttagaaaagtaccaggacagcctttaggcttgacagtaacaaca
gacgagcatggtcaactcatagtagctaggataatggccggtagtgcggccgccaagcaa
gccttactgtccgtgggagatgtcttgctggaggtggatggagtacagatagacacagaa
gaccagctcaaggaagctgtttccaagcccaatgacagggtcaccctgaaagtggggcct
aaccttaaggagaaaagttcacagctcacaaacaaacttacttgctacatgagagcgcta
tttgactataatcctaaggaggacacgttactgccgtgtaaagaaattggcttagaattc
aaaaagggagacattttacaagtgtcagacagaaaagatcccaactggtggcaagcgagt
cacgtggagaactccgatgtcgttgggttgataccctcaccagagttggaggaaagaagg
aaagcttacgtgccgcctgaagccgacttcgtacataaaattagtatatgtggggctagg
atatcaaaaaagaaaaagaaattcgtgtacgagtcccgttccagcgtacagctggaagga
gcagagttggctctgtatgaagaagttgcgcggacgccgcccttcctccgccgcgtgatg
gcgctagtgggcacgcgtggcgtcggtcgccgcacgctcaaaaaccgcttgatccaggac
catcccgaccggttcggagccgttgtgcctcacacgtcccggccgccgcggccgctggag
gaaaacggcttgtcgtattggttcgtgtcgcgcgaggagatggagcgcgacatccacgcc
ggccgcttcctcgagcacggcgaacacaacggacacttgtatgggacacatcttgactcg
atccgtgcggtcatcaaggaaggcaaaatgtgcatcttggactgcgcgccgcaatctttg
aaactgctccacaacagcagcgagttcttgccctttgtagtgatggtcgcggctcctggt
attgagcaactccggaatctcaccttcgcttccaaccggaacttgacgttcgaccggcag
agctccattcggttcagctctcggcgcgcgcgaacgctcgagtcgcttgcgtctctctac
gaggaagaagacataaagcaaaccctcgaagagagcgccaggatacagcgtcaacacgag
aaatacatcgacctcgtgatcactaaccacaacaacgatactacctactctaaaattatg
gacgcactccattcactttctactgaccaccaatgggtgcctgtcagttggatatactaa
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