Choristoneura fumiferana (eastern spruce budworm): 141426481
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Entry
141426481 CDS
T11020
Symbol
Atg4a
Name
(RefSeq) autophagy-related 4a
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04136
Autophagy - other
cfum04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141426481 (Atg4a)
04136 Autophagy - other
141426481 (Atg4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cfum01002
]
141426481 (Atg4a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141426481 (Atg4a)
03029 Mitochondrial biogenesis [BR:
cfum03029
]
141426481 (Atg4a)
Peptidases and inhibitors [BR:
cfum01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
141426481 (Atg4a)
Membrane trafficking [BR:
cfum04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
141426481 (Atg4a)
Mitochondrial biogenesis [BR:
cfum03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
141426481 (Atg4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
141426481
NCBI-ProteinID:
XP_073941509
LinkDB
All DBs
Position
3:8314037..8324701
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AA seq
382 aa
AA seq
DB search
MDAMFDICYLSADGNNPEPDDIPKTKDYVWVLGKKYSAIQDLDRIRRDITSILWCTYRKG
FVSIGDEGLTSDKGWGCMLRCGQMVLGVALIRVHLSSDWVWTPETRDPTYLKIVQRFEER
KQAPYSIHQVALMGASEGKEVGQWFGPNTVAQVLKKLVVYDKWSSLAIHVALDNTVVMED
ILQQCIVKNDRGDSSSTPDNVVVTDWMPLLLIVPLRLGLSEINPVYIDGLKICFQSPQSI
GVIGGKPNQALYLIGCVGDEVIYLDPHTTQRSGFVENKMTDDQKEIDCSYHCKYASRIPI
LAMDPSVAVCFLCRTRSDFDDLCKTIQQQLMKEAQALFEICEKRPAHWGPNADIDLQNTG
LFTEFEDIDRQFDDSDEEFEIL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatgctatgtttgatatttgttatttatctgccgatggaaacaaccctgagcctgac
gacattcccaagacaaaggattacgtttgggtgttgggtaaaaaatatagcgctattcaa
gatttggatcgcattaggcgcgatattacgtctatattatggtgtacgtacagaaagggg
tttgtgtctataggcgacgaaggccttacatcggataagggttggggctgcatgctgcgc
tgtggacagatggtacttggggtcgctcttattagggtacacttatcctcggactgggtg
tggactccagaaacaagggaccccacatatctgaaaatagtacaaagatttgaagaaagg
aaacaagctccatattcgatacatcaagtggcactgatgggagcatcagaaggcaaggaa
gtaggccagtggtttggacctaatactgtggcacaagttttaaaaaaattggtggtgtat
gataaatggagctcactagcaatacatgttgcattagataacacagttgttatggaagat
atattacaacaatgcatagttaagaatgacagaggggactcatcgagcacacctgataat
gttgttgttactgactggatgccgttattgctgattgtgccgctcagacttggactcagt
gaaataaatcctgtgtatattgatggactaaagatatgctttcaatcgccacagtctatt
ggtgtgataggcggcaaacccaatcaagctctatacttgatagggtgtgtgggagacgaa
gttatatacctagacccacacaccacgcagcggtctggttttgtagaaaacaaaatgaca
gatgatcaaaaagagatagactgttcctatcactgcaaatatgcttctcgcataccaata
cttgccatggacccttcagttgctgtttgcttcctgtgtcgcacaagaagtgattttgat
gacctgtgcaaaacaatacaacaacaactgatgaaggaagcccaagcactttttgaaata
tgcgaaaaaaggcctgcacattggggccccaatgctgacatagatctacaaaacacaggc
ctttttactgaattcgaagatattgacagacaatttgacgattccgatgaagaattcgaa
attctatga
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