Choristoneura fumiferana (eastern spruce budworm): 141426552
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Entry
141426552 CDS
T11020
Symbol
Caper
Name
(RefSeq) RNA-binding protein 39-like protein Caper
KO
K13091
RNA-binding protein 23/39
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
Spliceosome [BR:
cfum03041
]
Common components
Common spliceosomal components
General mRNP proteins
141426552 (Caper)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
141426552
NCBI-ProteinID:
XP_073941650
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All DBs
Position
3:10601540..10608030
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AA seq
537 aa
AA seq
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MAEDLDVEAMLEAPYNKSDTNSSSKHRSDKYSDKHKDKDRDSSRRRSRSRDRRRSRDRDT
RDSIRSSNKDDRRDKEREKDRGDRDRGSRRDRDKDRSHKDKERDRDRDRDKDRERERDRE
KRRSSKDKDKERSRERERSREKIVVKKEKTPEKEKDNGKEYRSKSRGLEPKLDELPPEER
DLRTVFCMQLSQRIRAKDLEEFFSSVGKVRDVRLITCNKTRRFKGIAYIEFRDAESVPLA
LGLTGQKLLGVPIIVQHTQAEKNRVGNTLPNLAPKTSNGPTRLYVGSLHFNITEDMLRGI
FEPFGKIDHIQLMTDPESGKSKGYGFLTFHHAADAKKAMEQLNGFELAGRPMKVGNVTER
TDGGSSTRFDADELDRAGVDLGATGRLQLMFKLAEGTGLQIPAAAASVLMGSGSALVSPQ
PQVAPPIATQCFMLNNMFDPSSETNPNWDIEIRDDVISECNKHGGVLHVYVDKASPQGNV
YCKCPTIATAVASVNTLHGRWFAGRVITAAYVPLVNYHSLFPDAMTALTLLLPTRAR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagatttagacgtggaggctatgctagaagctccgtataacaaatcggatacc
aattcctcatcaaagcatcgatcggacaagtattctgataagcacaaagataaggacagg
gatagcagtcgaaggcgcagccgatcaagagatagaagaagatcgcgagaccgggacact
cgggatagtattcgttcaagtaacaaagatgacaggagagacaaggaacgtgaaaaagac
aggggagacagggatcgtgggagccgaagagatcgtgacaaagatcgtagtcacaaagac
aaggagcgggacagggatagggacagggataaggaccgtgagcgagaacgtgatagggaa
aagcgtcgtagcagcaaggacaaagacaaagaacgtagtcgagaaagggaacgaagtcga
gagaaaatagttgttaaaaaagagaagacgcctgagaaagaaaaagacaatgggaaagaa
tatcgatcaaaatctagaggtcttgaaccaaagcttgatgagctgcctccagaagaacgt
gatttgcgtactgtattttgtatgcaactctctcaaagaatcagagctaaagacctggaa
gagttcttctcttctgttggcaaagtcagagatgttagacttataacatgcaataaaact
agaagatttaaaggaatagcttacatagaatttagagatgccgagtctgttcctttggct
ttggggttaacaggacaaaaactgcttggtgtgcctatcattgttcaacatactcaagca
gagaagaacagagtaggcaacacgctacctaatttggcaccaaagacgagtaatggccca
accaggctctatgttggatcattacattttaatattactgaagatatgctgagaggcatt
tttgaaccatttggaaaaatagatcacattcaactcatgactgatcccgaaagtggtaaa
agcaaaggatatggtttcttaacgtttcatcatgctgctgatgcaaagaaagctatggag
cagttgaacggatttgagttagctggaagaccaatgaaagtaggaaatgttactgaacgc
actgatggaggctccagcactcgttttgatgctgatgaacttgacagagctggtgttgac
ttaggagccactggtcgactgcagcttatgtttaaactggcagaaggcacgggactacaa
attcctgctgctgcagcttcagttcttatgggcagtgggtcagccttagtgagcccgcag
ccacaagtggctcccccaatcgccactcaatgcttcatgctcaataacatgtttgatcca
tccagtgaaacaaaccccaactgggacatcgagatcagagacgacgtcataagcgaatgc
aacaagcatggtggcgtgttacacgtgtacgtggacaaagcgtcccctcagggcaacgtg
tactgcaaatgtccgacaatcgccacagcagttgcctccgtgaacacgctacatggccgt
tggtttgcgggccgcgtcatcacggcggcgtatgtaccgctcgtcaactaccactctctg
ttccccgacgctatgacagccctcacgctgctcctaccgacccgggcacgataa
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