Choristoneura fumiferana (eastern spruce budworm): 141426555
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Entry
141426555 CDS
T11020
Symbol
Nup54
Name
(RefSeq) nuclear pore complex protein Nup54
KO
K14308
nuclear pore complex protein Nup54
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141426555 (Nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfum03019
]
141426555 (Nup54)
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141426555 (Nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
141426555
NCBI-ProteinID:
XP_073941657
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Position
Z:9829650..9866622
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AA seq
545 aa
AA seq
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MSTPFGNLTTPASSAPSMFGGSGFGTTTTKPATGFSSFGTTTGTSLGGTGSLTFGSTAPT
FGSTAPTFGTTAPTFGSTAPTFGTGATAFGSTAPTFGTNTLTTNTFGGTSTLSTGSTFGS
TFGQKPATTGFGGFGSGLNTTNPFGQQNQIQQQQQQPGPASAHEALVAAVFNCSVFGDER
DQVLAKWNLLQAQWGIGQAYYSRTAPPLELNEQNPLCRFKAVGYSRLGDQEDKDGHVAMM
FNKSAQDINTNKQVLQTSLFNLFGNKPNLTVNIDTVKALTENKSQVVIYVVDKNANGAHI
SASELAAFLNAGAARTALNGAGCGAVTAVTRPTAQALAQYLQTPPPGMDVRLWKQAQADN
PDPDNYIPVPIIGFSEIKSRARCQGEEASLQAEWLRRTGDELAELRTRRAASAARLAQQA
AKLHALRHTLLQAIGRKEVMGRVGAALSPEEEAVRARLHELASTLTSPPLYSGRLNELLS
AVRLQRSAIAGGSHERYQLDPGAQEDLKQFLTLQQRGMAHLLDTTRKDLDALNTIAEGMS
RLVRA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagtactccatttgggaacctgacaactcctgcttcatcagccccatccatgtttgga
ggctctggttttggtactacaactacaaaacctgcaacagggtttagttcatttggaacc
acaacaggcacatccttagggggaacaggaagtttgacttttgggagtaccgcaccaact
tttggcagtacggcaccaacatttggcaccactgcaccaacttttggcagtacagctccc
acattcggtacaggagcaacagcatttggcagtacagctccaacgtttggcaccaataca
ttgactacaaacacgtttggcggaacttctacgctaagcactggttcaacatttggatca
acttttggacagaagccagctacaacaggatttggtggatttggttcaggattgaataca
acaaacccctttggccagcaaaatcaaatacagcagcaacagcagcaaccggggccggcg
tcggcgcatgaagctctggtggccgcggtgttcaattgttccgtgttcggcgacgaaagg
gaccaagtgctagccaagtggaacctgttgcaggcgcaatggggtattggccaagcatac
tacagtcgcacggcaccgccgttagaactgaacgaacagaatccgctgtgccgtttcaag
gcagtcgggtactcgcgtctgggagatcaagaagacaaggatggacatgtcgctatgatg
ttcaacaagtcagctcaggatatcaacactaacaagcaagttcttcagacgtcgttgttt
aatctgtttggcaacaaaccgaatttgactgtcaatatcgacacagtaaaagcactcacg
gaaaacaaaagtcaggtggtgatatacgtcgtcgacaagaacgctaacggcgcgcacata
tcagcgtcagagctggcagcgtttttgaacgcgggagcggcgcggacggcgctgaacggc
gccgggtgcggggccgtcacggcggtcacgcggcccacggcgcaggcgctcgcacagtat
ctgcagacgccgccccctggaatggacgtgagactatggaaacaggcacaagcagacaac
ccagatcccgacaattatatacctgtccccatcattggattttctgagataaaaagccgc
gcgcgctgccaaggcgaggaggcgagtttgcaggcggagtggctgcgacgcaccggggac
gagctggctgagctgcgcacgcggcgcgccgcctccgccgcgcggctcgcccagcaagcg
gccaagctgcacgcgctacggcacacgctgttgcaggcaataggtcgcaaggaggttatg
gggcgcgtgggcgcggccctcagtccggaggaagaggcggtccgagcgcgcctccacgaa
ctggcgtccacgctcacctcgccgcctctgtacagcggtcgtctgaacgagttgcttagt
gcggtgcgtttgcaacgcagcgcgatcgcgggcggctcccacgaacgctatcaactagac
cctggtgcccaagaagacttgaaacagttcctaaccctgcaacagcgcggcatggctcat
ctcttagacacgacgcgcaaagacttggatgctctcaacaccatcgccgaaggaatgtcc
cgcctcgtacgggcctag
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