KEGG   Choristoneura fumiferana (eastern spruce budworm): 141426584
Entry
141426584         CDS       T11020                                 
Symbol
Wdr82
Name
(RefSeq) WD repeat domain 82
  KO
K14962  COMPASS component SWD2
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    141426584 (Wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cfum03019]
    141426584 (Wdr82)
   03036 Chromosome and associated proteins [BR:cfum03036]
    141426584 (Wdr82)
Messenger RNA biogenesis [BR:cfum03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     141426584 (Wdr82)
Chromosome and associated proteins [BR:cfum03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     141426584 (Wdr82)
    COMPASS/SET1 complex (yeast)
     141426584 (Wdr82)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR3_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_Aladin WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_NOL10_N Beta-prop_TEP1_C WDR90_beta-prop_4th DSE1_N Beta-prop_RIG_2nd Beta-prop_WDR75_1st CFAP251_N WD_LRWD1 PAC11 Beta-prop_WDR19_1st Beta-prop_VPS8 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N MIOS_WD40 Beta-prop_WDR41 Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 TRM82_WD MinC_C
Other DBs
NCBI-GeneID: 141426584
NCBI-ProteinID: XP_073941699
LinkDB
Position
3
AA seq 316 aa
MMMKLVDQVVRSFKVAKVFRENTDKINSIDFSPSGETLISCSEDDQIVIYDCEKGTQMIT
VNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTLCLSPV
EDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRS
FDKGPFVTFKLNQEKECDWTGLKFSRDGKTMLISTNGSIIRLVDAYHGTPLQTFTGHLNN
KGIPIEASFSPDSQYIFSGSTDGRVHVWNADTGYKVCVLNGDHPAPIQCVQFNPKFMMLA
SACTNMAFWLPTIDDV
NT seq 951 nt   +upstreamnt  +downstreamnt
atgatgatgaaattagttgaccaagtggttcgaagttttaaggtcgccaaggtgttcagg
gaaaatacagacaaaataaacagtatagatttttcaccaagtggagagactttaatatcg
tgtagtgaagatgaccagatagttatatacgactgtgaaaaaggcacccagatgataaca
gtaaacagtaaaaaatatggtgttgatctaatacacttcacacatgctaaaaatactgca
atccacagttctactaaagttgacgatacaatcaggtatctctcgctccacgacaataaa
tacatcagatacttcccagggcatacaaagaaggttgtgacattatgtttatcaccagtg
gaagatacatttttatctggatctctagacaaaacactacgcttgtgggatctccgatca
ccaaactgccaaggattaatgcatttgtctgggcgacctgtagctgcatatgaccctgaa
ggcttaatatttgcagctggagttaactctgaaagtattaaactatatgatctacggtca
tttgacaaaggcccttttgtaacattcaaactaaatcaagaaaaagaatgtgattggaca
ggattaaaattctcacgtgatgggaaaacaatgcttataagcacaaatgggtcaataatt
agattagtagatgcataccatggtactccactacaaacattcacaggccatcttaataac
aaaggtataccaattgaggcatcttttagccctgactcacagtacatattcagtggctcc
actgatggaagggttcatgtctggaatgcagatactggatacaaagtctgcgtccttaat
ggtgatcatccagctcctatacagtgtgttcaatttaatcctaagtttatgatgttagca
tcagcatgtactaatatggcattctggctgcccactattgatgatgtttga

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