KEGG   Choristoneura fumiferana (eastern spruce budworm): 141426616
Entry
141426616         CDS       T11020                                 
Symbol
Taf5
Name
(RefSeq) TATA-box binding protein associated factor 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    141426616 (Taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfum03021]
    141426616 (Taf5)
   03036 Chromosome and associated proteins [BR:cfum03036]
    141426616 (Taf5)
Transcription machinery [BR:cfum03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     141426616 (Taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     141426616 (Taf5)
Chromosome and associated proteins [BR:cfum03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     141426616 (Taf5)
    STAGA complex
     141426616 (Taf5)
    TFTC complex
     141426616 (Taf5)
    SAGA complex
     141426616 (Taf5)
    SLIK complex
     141426616 (Taf5)
SSDB
Motif
Pfam: WD40 WD40_Prp19 TFIID_NTD2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_TEP1_C NBCH_WD40 ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_SCAP WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_Vps41 eIF2A Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 141426616
NCBI-ProteinID: XP_073941744
LinkDB
Position
3:complement(11763831..11775317)
AA seq 653 aa
MGEKSTPLLAVLQLLRKYNLKGTEEILRKEASLGDAEIENLDLPEVELASILTAHHTESD
PYSYEFAYDSLKKFIETSLDVYKHELSTLLYPVFAHMYMILILYDHNEHAVNFLEKFGPD
QEDYYQDDLKKLSFIKSKEQVKGNELAEIYSTNKFVVQMSRDASTQLKRYLQEQKSSTVI
INIINNHVQIDIHDGPGRTLAQVRASSGSLLGEAPRNENRAKVFYGLLKEPDIQVLPAPT
EDEEETEETPDKPKKKKAKKDNIFMKKPKSDPNAPPNDRFPLPELKEADKIEKGKALREA
AKRVQLGPESLPSICFYTLLNSGHTATCADICDDSTLLAVGFNNSTIKVWTLTPVRLRGM
KSADKLQDIDREAGDVLVRMMEERDRDACRTLFGHSGPVFKVSFDPFKTMLLSCSEDATV
RLWSLQCWTCLVAFRGHVWPVWDVRWSPHGHYFATSGHDRTARLWATDHHQPLRIFAGHL
ADVDCVQFHPNSNYIATGSSDRTVRVWDCLTGNQVRIMTGHKSPIFTLAFSICGRWLASG
GGGGAGGELMVWDLSTGASAAALPPAHTAPLHSLAFSRDGTILASGSLDCTIKLWDFTAI
TDEVSVEDTANNSVQKEDKLLLRSFATKNSPITSLHFTRRNLLLAVGTYEGST
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgggagaaaaatccacacctctcctagcagtattacaactgcttcgaaagtataatctt
aagggtactgaagagatacttcgaaaagaggcaagtttaggcgatgccgaaattgaaaat
ttggacttgcctgaagtggaacttgccagcatactcacagcgcatcacactgagagtgat
ccatacagttacgagtttgcttatgacagcttaaagaagtttatagaaacttctttggat
gtttacaagcatgaactttcaacacttctgtatccagtgtttgctcacatgtacatgatc
ttaattttgtatgaccacaacgaacatgctgtcaatttcttggagaagtttggccctgac
caggaagactattatcaagatgacctgaaaaagttgtcatttatcaagagcaaagaacaa
gtaaaaggcaatgagctggctgagatctatagcaccaacaagtttgttgtgcagatgtca
agagatgcatcaacacaactcaagcgttacttacaagagcagaagagttctacagttatt
ataaacattatcaacaaccatgtacaaattgacatccatgatgggccaggaagaacatta
gctcaggtcagagccagctctggcagccttctcggagaagccccgagaaatgagaaccga
gcaaaagtcttctatgggcttcttaaggaaccagatatacaagtgcttcctgctcccacc
gaagatgaagaggaaacggaagaaactcctgacaaaccaaaaaagaaaaaagccaaaaaa
gacaacatatttatgaaaaaacctaagtcagatcctaatgcgcctccgaatgacagattc
ccccttcctgaactgaaggaagcagacaaaattgaaaaaggcaaagctctgagagaggca
gccaagcgtgtacaacttggaccagaaagtttgccgtccatatgcttctatacattactg
aacagcggtcacaccgccacttgcgccgacatctgtgacgactctactttattggctgtt
ggctttaataactcaactataaaggtatggactctcacgcctgtgaggctacgtggtatg
aaatcagccgacaaattacaagacattgacagagaagcaggagatgtactagtgagaatg
atggaggaaagggatagagatgcttgtcgtactttgtttgggcattcgggccctgtgttc
aaggtttcgtttgatccatttaagacaatgctgctgtcctgctctgaagacgcaacggtg
aggttgtggtccttgcaatgttggacatgtttggtcgcattcaggggccacgtatggccc
gtttgggacgtaaggtggtcgccccacggacattacttcgcgacatccggccacgaccgc
accgctcgcctctgggccaccgatcatcaccagcctctgaggatattcgccggtcatctc
gctgacgttgattgtgtacaatttcacccgaactcgaactacatagctacaggctcgagt
gacaggacggtccgtgtttgggattgcctcacagggaaccaagtgcggattatgactgga
cacaagtctccaatatttacgctggcattctcaatatgcggtcgatggctggcgtcaggc
ggcggaggcggcgcgggcggggagctgatggtctgggacctgtcgacgggcgcctccgcg
gctgcgttgccgcccgcgcacactgcaccgctgcactcgctagctttcagccgcgacgga
accatcttggcctcaggttcattggactgcaccatcaaactttgggattttactgcaatt
actgatgaagtctctgtagaagatacagcaaataatagtgtacaaaaagaagataagctt
ttattgcgttcatttgctacgaaaaattctcctatcaccagtttacatttcactaggcgc
aatcttttgcttgccgttggcacttatgaaggaagtacatag

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