Choristoneura fumiferana (eastern spruce budworm): 141426763
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Entry
141426763 CDS
T11020
Symbol
Top1
Name
(RefSeq) DNA topoisomerase 1 isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfum03032
]
141426763 (Top1)
Enzymes [BR:
cfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
141426763 (Top1)
DNA replication proteins [BR:
cfum03032
]
Eukaryotic type
DNA Topoisomerases
141426763 (Top1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
141426763
NCBI-ProteinID:
XP_073942010
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Position
3:complement(16096203..16105266)
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AA seq
955 aa
AA seq
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MSVENPASDNDCDSGKVNGNKSEHVNGVHNGYSSSEKHRSSHKSSSKDKHRDKDREHKSS
KHSSSNRDKEKEKHSSSKSHSSSHKSSSKDKERSEKEHKDRSDKEKERSDKESSNKDKER
SSKDKDRSDKDKHRSKDKHRDRDKSEKERSDRDKDKNKSSSSNGEKKSSSSSKDKEREHK
SSSSSKEHKSKDRDREREKDKHRSDKDKDRHRSDKDKHSSSKDKHSKEKKSNSDKPEKIK
SEPEDDPLKMEPMQLDEPELKREVKEEDSDDGYEGAVNNTASSCDYSLSQFKDEPLADLP
PEEESEEDTPLLSRMAAKRRVPSDSEDDTPLTQRKKSKKKIKKESGYDEEMSEDDEPAPK
KKPKSKPAKVKAKSEDDSVSPSKRKKKQDDEPEVWKWWEEEKKDDGTKWKFLEHKGPLFA
PEYEPLPENVKFRYDGKVVRLSEGAEEVAGFYARMLDHDYTTKHTFNNNFMTDWRKVMTH
EETKLIKDLSKCDFKEMQAYFQSVSEKNKNRSKEEKAALKAKNEEIQKEYGFCTIDGHKE
KIGNFRIEPPGLFRGRGEHPKMGMLKRRVMPEDVLINCSKDSKIPKPPQGHKWKEVRHDN
TVTWLASWTENVQGQAKYVMLNPSSKLKGEKDWQKYETARKLHKCIDKIRDTYRNDWKAK
EMRVRQRAVALYFIDRLALRAGNEKDDDQADTVGCCSLRVEHIQLHKEKDDKEHVVVFDF
LGKDSIRYYNEVPVEKRVFKNLELFMENKKGSDDLFDRLNTQTMNEHLKELMPGLTAKVF
RTYNASITLQRQLDELTDGDASVPEKILAYNRANRAVAVLCNHQRAVPKGHSKSMEALKE
KIQAKRDQVDEAEEDLRESSKAAKRGSVKEKLNYDKKKKALERLREQLKKLELQETDRDE
NKTIALGTSKLNYLDPRISVAWCKKHGVPLEKIYNKTQRDKFRWAIDMAGPEYVF
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgaaaacccagccagtgataatgattgtgactctggaaaggtaaatggtaat
aaaagtgaacacgtgaacggcgtccacaacgggtatagtagctccgagaagcaccgcagc
agccacaagtcttcgagcaaggacaagcatcgcgataaggaccgcgaacacaagagctct
aagcacagcagttcgaacagagataaagaaaaggaaaagcactccagcagtaaaagccac
agcagctctcacaagtcctccagtaaagacaaagaacgcagtgaaaaagaacataaagac
cgcagtgacaaggaaaaagaacgcagtgacaaggaaagcagcaataaggacaaagaaaga
agcagcaaggacaaggatcgcagtgataaagataaacaccgtagcaaggacaaacacagg
gacagagacaagagtgaaaaggagcggagtgatcgggataaagacaaaaacaaaagcagt
agcagcaatggcgaaaagaagtcttcatcctcttcaaaagataaggagcgagagcacaag
agctcatcttcatctaaggagcacaagtcgaaggacagagatcgtgaaagggaaaaggac
aagcatagaagtgataaagataaagataggcacaggagtgacaaggacaaacattcaagt
tctaaagacaagcacagcaaagaaaagaagagtaacagtgacaaaccagagaaaattaag
tctgaaccagaggatgatcccctgaagatggaaccaatgcagctggatgaacctgaactg
aaaagggaggtgaaagaagaagacagcgacgatggctatgaaggtgccgtcaacaacacg
gcttcgtcctgtgactactctttgtcgcagtttaaagacgagccactagcagacttacca
cctgaagaagaaagtgaagaagatacgcctctgttgtcgcgtatggcggcgaagcgtcgc
gtcccaagtgatagtgaggatgacactccgttgacgcaacgaaagaaatcaaaaaaaaag
atcaaaaaggaatctggttatgatgaggaaatgtcagaagatgatgaaccagcacctaaa
aagaagcctaaatccaaaccagcaaaagtaaaggcaaagtctgaagatgacagtgtcagc
cctagtaagcggaagaagaagcaagatgacgagccagaagtctggaaatggtgggaggag
gaaaagaaagacgatggaacaaaatggaagttcttggaacacaagggtccactgttcgcg
ccggagtacgagccgctgccggaaaacgtcaagttccgatacgacggcaaggtggtgcgg
ctgtccgagggcgccgaggaggtggcgggcttctacgcgcgcatgctcgaccacgactac
accaccaagcacaccttcaacaacaacttcatgactgactggcgcaaggtcatgacgcat
gaagaaaccaaactcatcaaggatctctccaaatgtgattttaaagaaatgcaagcctac
tttcaaagtgtatcggaaaaaaacaagaatcgttcgaaagaagaaaaagcggcgctaaaa
gctaaaaacgaggaaattcaaaaagaatatggcttctgcacaattgacggtcataaagaa
aaaattggcaatttcaggatagagcctccgggcttgttcagaggtcgtggtgaacacccc
aagatgggcatgttgaagcgacgtgtaatgcctgaggacgtgcttataaattgttctaag
gacagcaaaataccgaaaccacctcaaggtcataaatggaaagaagttagacacgataat
acggtaacgtggttagcgtcgtggactgaaaatgtacaaggtcaggcaaaatatgttatg
ctgaatcctagttcaaagttaaaaggtgaaaaagattggcaaaaatatgaaacagcccgt
aaattgcacaagtgtatagacaaaataagagatacctacagaaatgactggaaggcaaag
gaaatgagagttcgtcaacgagctgtagctctttactttattgatcgtcttgcattaaga
gctggtaatgaaaaggatgatgatcaggcagacacagttggttgctgttcactacgcgtg
gagcacattcaactacacaaagaaaaagatgacaaagaacatgtagttgtatttgatttc
ctgggtaaagattctataaggtattataacgaggtaccagtagaaaaacgcgtattcaag
aatctcgaactattcatggaaaacaaaaaaggaagtgatgacctctttgacagacttaac
actcagacaatgaatgaacatcttaaagaattgatgcctggactgacagctaaagttttc
cgtacctataacgcctctattacattacaaagacagttagatgagcttactgatggtgat
gcatcagtaccagaaaaaatattggcctacaatcgtgcaaaccgtgctgttgccgtgctc
tgcaaccatcagcgtgcagtaccgaagggccattcaaaatctatggaagctctaaaagag
aaaatccaagctaaacgcgatcaagtggacgaagcagaggaagacttgcgagagtcgtcc
aaggcggccaaacggggatccgtaaaagaaaaattgaattatgataagaagaaaaaagct
ctcgagcgcctgcgggaacaactcaaaaaactagaattgcaggaaactgatcgtgatgag
aacaaaactattgcacttggaacttcaaagctcaactaccttgatccacgaatttcagta
gcttggtgcaagaagcatggtgtgccgcttgagaagatctacaacaagacgcagcgcgac
aagttccgctgggctatcgacatggccggccccgagtacgtcttctaa
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