Choristoneura fumiferana (eastern spruce budworm): 141426784
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Entry
141426784 CDS
T11020
Name
(RefSeq) uncharacterized protein
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfum03019
]
141426784
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
141426784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
141426784
NCBI-ProteinID:
XP_073942056
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All DBs
Position
3:16550846..16563951
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AA seq
1018 aa
AA seq
DB search
MSKQGKRKITVEIPKTKDLANRPSVFERLGTKKTSSAKKTTEHCRQWAQHGSCAYGKSCK
FAATHTLISPSKQRAANKDSEQKRLVKDDGKSRLHSTVVVRSGRSPDGEIDNWDQNDLEY
ADTDVLEKRRQQLQRELELQLKMDSSKDMRKEKKKPVSSSSSSRSSSSSSVSSSSSDGSS
SSSSSGRETRRKAKKGKLKRNSSSSSEGDVPSKKKFVKNDAKRDKSETKKTNVKKDDRLL
KKTDVAKKKPLTKAALGKKSLSPGKKSGGTPPISSKSISKAVPKHGKSPVKRDKKSASPH
SVKDRDKERDRKDKDRDKERDKEREKERDRTRGRSRSPRKARSRSPRPHTSHPKDLRRKE
SSERSRPVSPKKQVRREGSTERHRKRSGSKDRDRGRDHKDRSLERRKEKHDDKDRHDRKD
RGRERNKEGSKRDDSKRRGRDRGLGSRGPDKGLEKPNKPMERLLPRPEERLAALAAISNR
ALETDKNSPSSKDRQDTHSERGGRKPDRMERDRSIKRDRIGSLDREPGDYEMGMERNYDR
GHGVDQYERMEDRYDDGPRDDDRSPGYGRDRHYDAGYDMAGPSRGYPEDDERLYAERMGD
HRGVDMGYDDRRPHRDHSWEGRSGSLDRERNYMQPHKDWDNEDYRAAGDWSRERHWPLHD
PQMNEWGDKDADVDGWHRRGHPGPHRGRMHDDYNRGIRMDMREGNKRRPPRNEPEAAAKE
PAPAAQSAQPAAAPPPRTDADVDDKPIPDDLSEISDDPDDILNREDMLDQSMDEDSQVAQ
TTEESTKLEGSEKESTQDTSGAGEDKESHGAKNDEDVTDLDFEEISDGELEEERTRAGLG
DALGVDWASLVADVHRRERTAPTGGARDRWKPERVLARLGLSIHMAGKNTVQEIMHKNAE
SLQAEQVTNVEPRSELAANIQNGKHDIDDKPAVVTDVNTLHPVAAMQVAVEKRKRQRAVL
FGSGCEITRALSARRDLALRRYLCHLPAAERTGQSRVAPQPSLFHAARALLMQAPVSG
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaggcaaaagaaaaattactgtcgagataccgaaaacaaaagaccttgcg
aacagacctagtgttttcgagcgtctaggaactaagaaaacttctagtgcaaaaaaaaca
actgaacattgtagacagtgggcccaacacggaagttgcgcttacggtaaaagttgtaaa
tttgctgccacacacacgttgattagtccgtctaagcaacgggcagctaataaagacagt
gaacaaaaacgattggtgaaagatgatggaaagagtaggttacattccacagtcgtagtg
agatcgggtcgtagtcccgatggtgaaatcgacaactgggatcaaaatgacctagaatac
gccgacacggacgttctggagaaaagaaggcagcagcttcagcgtgagctcgagttacag
cttaagatggactctagtaaagacatgcgaaaagaaaaaaagaaacctgtttcgagttcc
tcatcatcgaggagttccagctcctctagcgtctcttcctcttcgtctgatggcagttct
tcatcctcttcttctggcagggaaactaggagaaaagccaaaaagggaaaactaaaaagg
aattctagttcttcatcagaaggtgatgtcccttccaaaaagaaatttgttaaaaatgat
gctaaaagggataaaagtgaaacaaagaaaacaaatgttaaaaaagatgatcgactgctt
aaaaaaactgatgtagccaaaaagaagcccttaacaaaagctgctcttggcaagaaatct
ttatcacctgggaagaaatcgggtggtacaccccctatatcatcaaaaagtatttcaaag
gcagtgcctaagcatggtaaatctcctgtaaagagagacaaaaagagtgcttccccacat
tcggttaaagaccgtgataaagaacgagatagaaaagataaagacagggacaaagaaaga
gataaggaacgggaaaaggaaagagatcgcaccaggggtcgaagtagatcaccaagaaaa
gctagatcaagatcaccaaggcctcatacatctcatcctaaagaccttaggcgaaaagaa
agttctgagaggagtcgcccagtttcgcccaaaaagcaagttaggcgtgagggtagcact
gaaaggcacagaaaacgatcaggcagtaaagaccgtgatagaggacgtgatcataaagat
agatccttagaaaggcggaaggaaaaacacgatgataaagatagacatgataggaaagac
cgaggacgagaaagaaataaagaaggtagtaaacgtgacgatagtaagcgaaggggtcgt
gataggggactaggtagtcgaggaccagataaaggtcttgaaaaaccgaacaaaccaatg
gaacgtttgctaccacggcctgaagagcgtttagctgctcttgcagctatctctaacaga
gctcttgaaaccgataaaaattcacctagctcaaaagatcgtcaagatactcattctgaa
agaggcggccgtaagccagatagaatggaaagagatcgttctattaaaagagatagaatt
ggaagcttggatagagaacctggcgattatgaaatgggcatggaacgtaactatgatcgc
ggtcatggggtagatcaatatgaaagaatggaagatcgatatgatgacggccctagagac
gacgatagatcgccaggttacggcagagatagacattatgacgccggatacgacatggcc
ggcccgtcgagagggtatcctgaggatgacgagcggttgtatgctgaacggatgggagat
catcgtggtgttgacatgggatatgatgatcgtcgtccgcatcgcgatcattcgtgggag
ggtcggtcggggtctttggaccgagaacgaaattatatgcagcctcacaaagactgggac
aacgaagattaccgtgcggccggagactggagccgcgagcggcattggcctttgcatgac
ccacagatgaacgagtggggtgacaaagatgctgatgtggatggttggcatcgcagaggt
caccctggacctcaccgtggccgaatgcatgacgactacaatcgtggtataagaatggac
atgagagaaggtaataaaaggcgccctcctcgtaatgagccggaggcagcggctaaggag
ccggcgccagcggcacaatcggcgcagcctgcagccgctccgccgccgcgcaccgatgct
gacgtggatgacaaacctatacccgacgacctcagcgagatcagtgatgatcctgatgac
attcttaacagagaagacatgttggatcagtctatggacgaagacagccaagttgctcaa
acaacagaggaaagtacaaagcttgaagggtccgagaaagaatccacacaggatacaagc
ggagcaggggaagataaggaatcccatggcgctaagaatgatgaagatgtaacggattta
gattttgaagaaatatcggatggagagcttgaggaggaaagaactagagctggcttagga
gatgctctcggggtagactgggccagtcttgtggcggacgtgcatcggcgagagcggact
gcccccaccggaggcgcccgtgaccgctggaaacctgaaagagttcttgcacgtcttggc
ctctctattcacatggctggcaagaacacagtgcaggaaataatgcataaaaatgccgag
agtttacaagctgaacaagtgactaatgtcgaaccgagatccgaacttgctgcaaacata
cagaatggcaaacatgatattgatgacaagccagctgttgtcacagatgtgaacactttg
catccagttgctgctatgcaggtggctgtcgaaaagcgtaaacggcagcgcgctgtttta
tttggatccggctgtgaaatcaccagagccctcagtgcgcgtcgagatttagcgctccgg
agatacctgtgccatctgcccgccgcggagcggactggccagtcccgagtggcgccacag
ccatcgctgttccacgccgcgcgcgctttacttatgcaagcgccagttagtggctga
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