Choristoneura fumiferana (eastern spruce budworm): 141426906
Help
Entry
141426906 CDS
T11020
Name
(RefSeq) uncharacterized protein
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfum03000
]
141426906
Transcription factors [BR:
cfum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
141426906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
141426906
NCBI-ProteinID:
XP_073942258
LinkDB
All DBs
Position
3:21634895..21672113
Genome browser
AA seq
222 aa
AA seq
DB search
MSLGKQPVEHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEMEKRPF
IDEAKRLRALHMKEHPDYKYRPRRKPKALIKKEPKFGFGISGLMAPVPRLLTPSMPHPMP
QMPMPHHLMQDKPELSRALFPPLPYPFYPFAKLPSDDGKLAAELAHLQALYGGALYGSAL
YSSALSPCGCPPRRSPSPPADVKRPVAYVLMKSDEEPPQHVI
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttaggaaagcaaccggttgagcatataaagaggccgatgaatgcttttatggtg
tggtcaagagggcagcgaaggaagatggctcaggacaatcccaagatgcacaattcggag
atatccaagaggctgggtgcggagtggaagctgttgactgagatggagaagcggccgttc
attgatgaagcgaagaggttgagggcacttcatatgaaagagcacccagactacaagtac
cggccgcggcggaagcccaaagcgctcatcaagaaggagcccaagttcggctttggcatc
agcgggctcatggcgcccgtgccgcggctcctcacgccgtccatgccgcaccccatgccg
caaatgcctatgcctcatcacctaatgcaggataaaccagagctgagtagggcactgttc
ccgccgctgccgtacccgttctacccgtttgcgaaactaccctcagacgatgggaagctg
gcggcggagttggcgcacttgcaggccttatacggcggcgcgctttacggaagcgcgcta
tacagcagcgccctctccccctgcggctgtcccccccgccgcagcccctcgccccccgcc
gacgtgaagcgaccagtcgcctacgtcctgatgaagtccgacgaggaaccgcctcagcac
gtcatatga
DBGET
integrated database retrieval system
