Choristoneura fumiferana (eastern spruce budworm): 141427300
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Entry
141427300 CDS
T11020
Name
(RefSeq) sorting nexin-4-like
KO
K17919
sorting nexin-4
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141427300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141427300
Membrane trafficking [BR:
cfum04131
]
SNARE
SNARE associated proteins
Others
141427300
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
141427300
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
141427300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PX
Vps5
GMIP-like_FCH
Foie-gras_1
FAM92
Motif
Other DBs
NCBI-GeneID:
141427300
NCBI-ProteinID:
XP_073942723
LinkDB
All DBs
Position
4
Genome browser
AA seq
419 aa
AA seq
DB search
MSAENSPIKPSRSPRVIETIEDYESQDTLIKHVDISIVESEKRANGTLHVRDHYTVYLID
LKVTDPDYNLVQSKISTIWRRYTEFEQIHDYLLVTYPHCIVPPLPEKKVLYAWRKSDTTD
PEFVERRRAGLENFLLRVASHPILGLDDQFINFLQQEHGWRETITDSGYLLQAENKIKSL
SVSIRLKKPDPEIESVKNYGKQLETNLGNFLYTRSKIIEKNYALCKLHANYGKLFSEWSV
IEKDMGDGLQKAGHYFDSIAEGIDAVAEDEEQLADQLKEYLFYAAALQQLAHNHEAMQRA
AEAAHDTLESRIQERSRAAAGKAGLMSRLFGGTDPDIVRDQTTRALDARILLDQQNIAQA
KRDLEEFSKKAAIEIEHFQKQKDKDLHESLVGFISLQVKAAKKNLQAWTQIKECLQNMP
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagaaaattcaccgataaagccttcaagatcgcccagagtcatagaaacgata
gaggactatgaatcccaggacacattaattaaacacgtcgatatatcaatagtggagtca
gaaaagcgtgcaaatggtaccttgcatgtcagagatcactacactgtctatctgatagac
ttgaaagtaacagatcctgactataacttagtgcaatcgaaaattagtaccatttggagg
cggtacactgagtttgaacaaatacatgactacctactcgtaacctacccacactgcatt
gtgccaccgctcccagaaaagaaggtgttatacgcttggcgcaagtcggacactactgac
ccagagtttgtagaaaggaggcgagctggcctcgagaacttccttcttcgggttgcgtcg
caccctatactcggcttagatgatcagttcatcaacttcctgcagcaagagcatggatgg
cgggagactatcactgacagtggatacttactccaagcggaaaacaaaattaaatctctg
tcagtatcaattagacttaaaaagccagatccagaaattgagagtgtcaagaactatggc
aaacagcttgagactaacttgggaaattttctatatactaggtctaaaattatagaaaag
aactatgcgctttgcaagttgcatgccaactacggaaaactgttcagcgagtggagtgtc
atcgagaaagacatgggcgacgggttgcagaaggcgggacattactttgactcaatagca
gaaggcatcgacgcggtggcagaggacgaggagcagctggcggaccagctgaaggagtac
ctgttctatgcagccgcgctgcagcagctcgcacacaaccacgaagccatgcagcgggcg
gccgaggccgcgcacgatactctcgaaagcagaatacaggagcgcagtcgcgcggcggcg
ggcaaggcggggctgatgtcgcgtctgttcggcggcacggaccccgacatcgtgcgcgac
caaaccacgcgcgcgctggacgcaagaatcttgctggaccagcagaatattgcgcaggcc
aagcgggacctcgaagaattttcaaaaaaagccgctatagaaatagaacatttccaaaag
caaaaggacaaagacctccacgaatcactcgtcggttttatatcactgcaggtcaaagct
gctaaaaagaacttacaagcgtggacccaaataaaggaatgccttcagaacatgccctga
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