Choristoneura fumiferana (eastern spruce budworm): 141427335
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Entry
141427335 CDS
T11020
Symbol
Efa6
Name
(RefSeq) exchange factor for Arf 6
KO
K12494
PH and SEC7 domain-containing protein
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141427335 (Efa6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfum04131
]
141427335 (Efa6)
Membrane trafficking [BR:
cfum04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
141427335 (Efa6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_9
Sec7
PH
PDZ
PDZ_6
PDZ_2
DUF6288
Mrr_cat
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
141427335
NCBI-ProteinID:
XP_073942767
LinkDB
All DBs
Position
4:complement(5718843..5760048)
Genome browser
AA seq
976 aa
AA seq
DB search
MADERLVVLNRSDNLGFGFSLLGEAGLPHIIYEIEENSPAARSGEVEAGDVLLKVNGTDV
NRFTTREVLKCLRLSSDPVTLRLKKDPQVKANVRRYLASTERRNSAPRANNKSSPPSSNS
NSNSNSNSSSNSSSNGSGVQSGESCEALLADERVERRPRAHQPKFEAYMMTGDLMLNLSR
VEHPHHNNHAPMHRTHYHRYNSTPASPNEGRLGARGETAQRHNSSPDTGLVGEHASKLFS
SQPASPAGGAAAATASEMGARAPLSVRTSRSEDHLQKESSLSAVAVEMEEDVTSSLNTLL
DARPDSATPGPRSESDAERDRIVWTYNAPVSCASERSHCNGSGATSNSTSISDGISQRSS
SPASPTSVSSSVMSSRATPPHRAPLPSAAHHHRHLNGDMSLSEAVSNISSPDYQDQDDMF
ETGRECPRMELSDPSDSDSTILVSEPCHKRAKSNSSYSNDHGSDVTLNGDNNDYRIVIQV
KGADKQNANAESVNNNNSYAQNGKENGHSLPESHGYQELCSSSEVGSDEGSDGDSLHSFH
YSPKAVDIPSAERLAKRLYHLDGFKKSDVSRHLSKNNEFSRAVAEEYVKHFSFAGATLDA
ALREFLARFALSGETQERERVLVHFSRRYLECNPGSFNSQDAVHTLTCAIMLLNTDLHGL
AAAAAGGAFRRMSCAEFVDNLADLNDGDNFPRDTLKHLYHAIRTQPLQWALDSEAPAAAS
GGGEPLRVGANPFLDVPDQARAVEYKKGYVMRKCCVDPNGKKTPFGRRGWKMFYCTLRDL
VLFLHKDEHGFRRGQMSDNLHNAIRIHHALATKATDYTKKQHVFRLQTADQAEYLFQTSD
SKELCSWVETINFVCAAYSAPPLAGAVGSQRKFQRPLLPCAHTRLSMREQLAAHEERAAR
LEEELAALRHARDAPHAPHARDKDHYLVYEIKRYRTYAYVMRARAGGAGAEEAAPALPLR
APPAPAPAPAPPAAPP
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgaaagactagtggtcctaaaccgtagtgataatttaggattcggattctca
ctgcttggcgaagccggtttgccacacataatatacgaaatcgaagaaaattctcctgca
gctcgtagcggcgaggtggaggcgggagatgtattgctcaaggttaatgggactgatgtg
aaccggttcactaccagagaagttttaaaatgtttgcgactatcgtcggatcccgtcact
ttaagactgaaaaaggaccctcaggtcaaagcgaacgtgcggcgatacttggcttcgaca
gagcggcggaatagcgcaccgcgcgccaacaacaaatcgagcccaccgtctagcaactca
aacagcaactcgaacagcaactcatccagcaactcgtccagcaacgggtcgggcgtgcag
tctggcgaaagctgcgaggcgctcctagcggacgagcgcgtggagcggcggccgcgggcg
caccagcccaagttcgaagcctacatgatgaccggggacctaatgctcaacttgtcccgc
gtggaacatccgcaccataacaaccacgcgcccatgcatcggacacactatcacaggtac
aattccacgccggcttctccgaatgagggtcgcctgggcgcgcgcggagagaccgcacag
cgtcacaactcgtcccctgataccggtctcgttggcgaacacgcctcaaagctgtttagt
tcgcagcctgcgtcgccggcgggcggtgcggcggccgcgaccgcgagcgagatgggcgcg
cgcgcgccgctctcggtgaggacttcgcgctcagaggaccatctacagaaggagtcgtcc
ctgagcgcggtggccgtggagatggaggaagacgtgacgtcatcactgaacacgctgctc
gacgcgcggcccgactcggccacgcccggcccgcgctccgagtccgacgccgagcgagac
aggattgtatggacatacaacgcaccagtgtcatgcgcgtcggagcggtcgcactgtaat
ggctctggcgccacctctaactccacctccatctcagatggcatatcgcaacggtcgtcg
tccccggcgtcgccgacgtcggtgtcttcgtcggtgatgtcgtcgcgcgccacgccgccg
caccgcgcgccgttgccgtccgccgcgcatcaccaccgacacctcaacggcgacatgagc
ctatcagaagcggtctcgaacatttccagtcctgactaccaggaccaagacgacatgttc
gaaaccggccgcgagtgcccgcggatggagctctccgacccttcggactcggactccaca
atcctagtctccgagccttgccacaagcgggccaaatctaattcctcctactccaacgac
cacggcagtgatgtgactctcaacggtgataacaatgactatagaatagtgatacaagtg
aagggcgctgataaacagaacgctaacgcggagagtgtaaataataataatagttacgcg
caaaacgggaaggagaacgggcacagtttgccggagagtcatgggtatcaagagttgtgc
agcagttcagaagtgggctcggacgagggctcggacggcgactctctgcactcgttccac
tacagcccgaaggccgtggacatcccgtcggccgagcgcctcgccaagcggctctaccac
ctagacgggttcaagaagtcagatgtttccaggcatttgagtaaaaacaacgagttctcc
cgcgccgtggcggaggagtacgtgaagcacttttcgttcgcgggcgcgacgctggacgcg
gcgctgcgcgagttcctggcgcggttcgcgctcagcggagagacgcaggagcgggagcgc
gtgctcgtgcacttctcgcggcggtacctcgagtgcaacccgggatccttcaactcgcaa
gacgcggtgcacacgctgacgtgcgcgataatgctgctgaacacggacctgcacgggctg
gcggcggcggcggcgggcggcgcgttccggcgcatgtcgtgcgcagagttcgtcgacaac
ctcgccgacctcaacgacggcgacaacttcccgcgcgacacgctcaagcacctctaccac
gccatacgcacgcagccgctgcagtgggcgcttgacagtgaggcgccggcggcggcgagc
ggcggcggcgagccgctccgcgtgggcgcgaaccccttcctggacgtgcccgaccaggcg
cgcgccgtcgagtacaagaaaggatacgtcatgcgcaaatgctgcgtcgaccctaatggc
aagaagactccgttcgggcggcgcggctggaagatgttctactgcacgctgcgagacctc
gtgctgttcctgcacaaagacgagcacggcttccgccgcggacagatgtccgacaacctt
cacaatgccatcagaatacatcacgccctggcgaccaaagcgacggactacacaaaaaaa
caacacgtattcagattgcaaacagcggatcaggccgagtatctctttcaaaccagcgac
tcaaaggagctgtgttcgtgggtggagacgatcaacttcgtgtgcgcggcgtactcggcg
ccgccgctggcgggcgccgtcggctcgcagcgcaagttccagcgcccgctgctgccctgc
gcccacaccaggctctccatgcgcgagcagctggcggcgcacgaggagcgcgcggcgcgg
ctggaggaggaactggcggcgctcagacacgcgcgcgacgcgccgcacgcgccgcacgcg
agggacaaggaccactacctcgtgtatgagataaagaggtaccgcacatacgcgtacgtg
atgcgtgcgcgcgcgggcggcgcgggggcggaggaagcggcaccggcgctgcccttgcgt
gcgccccccgcccccgcacccgcgcccgcgccgcccgccgcgccgccctga
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