Choristoneura fumiferana (eastern spruce budworm): 141427441
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Entry
141427441 CDS
T11020
Symbol
snRNP-U1-C
Name
(RefSeq) small ribonucleoprotein particle U1 subunit C
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141427441 (snRNP-U1-C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfum03041
]
141427441 (snRNP-U1-C)
Spliceosome [BR:
cfum03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
141427441 (snRNP-U1-C)
Complex B
141427441 (snRNP-U1-C)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
Motif
Other DBs
NCBI-GeneID:
141427441
NCBI-ProteinID:
XP_073942987
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All DBs
Position
4:complement(11148633..11150096)
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AA seq
163 aa
AA seq
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MPKYYCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQHLIDATTAAFKAG
KIAQNPFGGKGAAIPPPWDPSVMGPGGPRPPVPTPGGPPGMLPPQAMGPGGPMAPHMMMG
PHGPMPPMMGMRPPMMMGMGPMGPMGPMGQMRPPLMNGPPMNK
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaatattattgtgattattgtgatacttacctaactcacgattcacctagcgtg
agaaaaacacattgtacgggccgaaagcataaagacaacgtgaagttctattaccagaaa
tggatggaggagcaagctcaacatctcatagatgctacgacagccgcgtttaaagctggg
aaaatagcgcaaaatccattcggtggaaaaggtgctgcgattccgcctccttgggatcct
tctgtgatgggacctggagggccgcggccgccggtgccgacgcctggtggtcccccggga
atgctgccgccccaagctatgggtcctggcggcccgatggcacctcatatgatgatggga
cctcacggaccgatgcctcctatgatgggaatgagaccgccaatgatgatgggcatgggt
cctatgggcccaatgggacccatgggtcagatgcgaccgcccttaatgaatggaccgcct
atgaacaaatag
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