Choristoneura fumiferana (eastern spruce budworm): 141427848
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Entry
141427848 CDS
T11020
Symbol
BBS1
Name
(RefSeq) LOW QUALITY PROTEIN: Bardet-Biedl syndrome 1
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cfum03037
]
141427848 (BBS1)
Cilium and associated proteins [BR:
cfum03037
]
Primary cilia and associated proteins
BBSome
141427848 (BBS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
BBS2_Mid
Beta-prop_EML_2
PQQ_2
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
141427848
NCBI-ProteinID:
XP_073943535
LinkDB
All DBs
Position
5:complement(19838003..19849758)
Genome browser
AA seq
614 aa
AA seq
DB search
MSSMTRWLDVEVGTDDVELNTLPGNLSLVDLHNDNEYRLLLGDLGRGEEGPRLRIFQGVR
QVSDMILPDLPLAVVSLYTNESQPMSLPIIAVAFSSCIYIYRNMKLFYKYYLPSVELSTN
ETEIWKQLIDPVNQNPVTVSTYTESLRSIPEKILSLQSRNLLSMTVDQQLEYLEHVSSLP
VMDLPDITCVTSMKMNSVDRYGAGCLIVGTEEGDVIVLESQTFAPLSQAKLCVVRKTPYQ
MVATGLFNVDYRLTVATREKSVCLLKREWSEGRVLFSTPEHIIAIEVMPADNSVLVICAD
NTLACYSKKGKKQWSLNLEHRPVSMTLVPVSHLGLTLAAVALASGHVHLYDGKARRDTIF
VRDVASVMKFGQLGQEEHVFIIVTASGHLMLKILKRTADFNAHGVGVESSAPTFGHKPWL
IPKKSKLFLEQSVRERENAVGMHVLFQQELTRLRLMAAKTLCEAHLKSDNSVGAGALEPV
RLAAEVEGLGPVFRVTLSVENTCADKAVVGLAVLFHAHTANYKVSQPYIKVPLLAPNSKL
RFPTKVEEVFDAELNPDIFFRSVTGQGGERALVKVLLLKEGRRGPVLAATIQMPPTDPMM
LPYDKIQATADFGS
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcatgacccgttggttggatgtagaagtaggcacagacgacgtggaacttaat
acactgccgggtaacctaagtctcgtggatttgcataatgacaatgagtatagattgctg
ctcggagatttgggacgaggcgaagaaggacctaggctgaggatatttcaaggtgttaga
caagtatcagacatgatcctaccagacttaccgctagcggttgtgagtctgtatactaat
gaatcgcagcctatgagcctgcccatcattgctgtggcattcagctcttgtatctacatc
taccgtaacatgaagttgttttacaagtattatctacctagcgtggagctcagtacaaat
gaaacagagatttggaaacagcttatagacccagtgaaccaaaaccctgtaactgtttca
acctatacggaaagcctaagatccatcccagaaaaaattctaagcctgcaatcaagaaac
ttgctctcaatgactgtggaccaacaactagagtaccttgaacacgtctcaagcttaccg
gtcatggacttgcctgatattacctgcgtcactagcatgaagatgaattctgtggatcgg
tatggcgctggttgcttgattgttggtactgaggaaggagatgtgattgtgctagagtcg
cagacgttcgcgccattgtcacaggcaaagttgtgcgtggtcagaaaaactccgtaccaa
atggtggcaacagggttattcaatgtggactatagacttaccgtggcaacgagggagaaa
tccgtatgtctgctgaagagggagtggagcgaaggtcgagtgctcttcagcacgccggaa
cacatcatcgccatcgaagtgatgccggctgacaacagtgtgctggtcatctgtgctgac
aatacgctcgcttgttacagcaaaaagggtaagaagcaatggtcgctcaacctggagcac
cggcccgtgtcgatgacgctggtgccggtgtcgcatctcgggctcacgctggctgcggtc
gcgctagcctctggacacgtgcacttgtacgatgggaaggcgagacgggacaccatcttc
gtcagagatgtagcgtctgttatgaagttcggacaacttggtcaagaggaacacgtcttt
atcattgtcacagcaagtggtcatctcatgcttaaaatattaaagaggacggcggacttc
aacgctcacggcgtgggtgtggagtcgtccgctcccacttttgggcacaagccgtggctt
atacccaagaagtcgaagctgttcctggagcagagcgtgagggagagggaaaatgctgtc
ggcatgcacgtattgttccaacaagaactgaccaggttgcggctgatggcagccaaaacg
ttgtgtgaagcccacctcaagagtgacaactccgtcggcgccggcgcactggagcccgtc
agactcgcggctgaggtggaaggtctgggcccggtgtttcgggtgacgctgtctgtggag
aacacgtgcgccgacaaggcggtcgtggggctggctgtgctgttccacgctcacaccgcc
aattacaaggtgtcgcagccgtacatcaaggtccctctcctagcaccgaacagtaagctc
cgcttccccacaaaagtggaagaagtgttcgacgcggaactcaacccggacattttcttc
cgctccgtgaccgggcagggcggggagcgggcgctagtcaaggtgctgctgctgaaagag
gggcgccgggggccagtgctggctgccaccatacagatgccacccactgaccctatgatg
ctgccttacgataagatacaggctacggcggattttggatcctag
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