Choristoneura fumiferana (eastern spruce budworm): 141427878
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Entry
141427878 CDS
T11020
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfum04121
]
141427878
Enzymes [BR:
cfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
141427878
Ubiquitin system [BR:
cfum04121
]
Ubiquitin ligases (E3)
HECT type E3
141427878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HECW1_helix
WW
HECW_N
Motif
Other DBs
NCBI-GeneID:
141427878
NCBI-ProteinID:
XP_073943569
LinkDB
All DBs
Position
5:664571..832007
Genome browser
AA seq
1567 aa
AA seq
DB search
MSEDHDDCEISDQNTETSETNGVGHVTDEEECAKEGNEKGSELPEEVDEGRDEAKEEEAV
SVGAKETGKLEWELDGLKCRIKWNLPEGSTSPKDYIALCYAESGGVVGRVPATGCASAGI
MWLLDEPNQPYEDCEQLLCFRYYSGSEQELASAAAPALPARLRAELRKLPLRLKEGVSRK
RGGDAPAPQAYHNRSFEPTEPEPADLGRLSDTVNRCSISNLESDGNEPRPETKCDPSKIV
DSSLINESRTVNSESRCATDEPTSSGVKKKCPPPVDTGGAPPDAAKKKSKMNGGLESPTS
PGTEYYKIWSPKNPCKIMKFVYEVEGGKVPEEAVGATKAGGPEAEAAGPPLPPRAAHRPL
QRSRALEPPPHPPQVPRHRKPKKLTKPEDAFTFELIDTDEQFFTDSNISNSAALQGGLDD
FEPGEFYTGGQAAMSSTASFWRGGRDVAPLATPETDGSLCESTVSSIKLSRLIDDKKSKD
VPDGFPSVSRNRVLFIKDIGPDNYITTTFARKDRMPPPSDTVDGANLTPNHAKSEEKAQH
TFLNDISNHSEFEDDNRNQIEEKEITTLKGHKPLTRQNSGRAHTPTMMTAFLNSSHVDPG
RRENGSDAPSSCNSSHSTSPVDETNKMLPSVGTMIMNRKYSCDSSTPKHSSLPRHLLKNL
GCEGTPKHSPTNSGSRTLDSPVRPHPRALTRVAALSGAAPQCPPTPTHHARRPHPATPPD
LAPPPVNSDNRENFELLEYTNELRTTEIRSPNMEFANSNHFTIVHAGPPDDVVLRRPRPP
EHSDDNENAVASPTPLRHMAGIRLPSIPERASRQMALTGDFPANMIGGIIECEEPLPAGW
EARMDSHGRVFYIDHVSRSTTWQRPGANGAAPRSPAPEVQRRQLDRRYQSIRRTMTRAAD
EEAPPAAGPSRAPPAAPHPAADFLARPDFYSILHMNQEASSLYNCNSTLKHMISKIRRDT
SSFDRYQHNRDLVALVNMFSDADRDLPLGWDTKLDRNGKRFFVDHVMRRTSFMDPRLPRA
ASAGPFSPLLPPRRRPLLAEQLDIKYLCTGVGPTLAPTPPPRPPLSAGDAHARTHHEIPV
AYNDKVVAFLRQPNIMSILRERCGGPGCGRGGRAGGALRDKVNAVRVEGAPALARYQHDV
QLTCMLSLFEQEIMSYVPAEGRACASPAASPAPARSTRAPAPQRRDFEAKLRAFYRKLET
KGYGQGPGKLKLHIRREHLLEDAFRRIMSCGKKELQKGKLCVLWDGEEGLDYGGPSREFF
FLLSRELFNPYYGLFEYSANDTYTVHVSPMSAFVDNHHEWFRFSGRVLGLALVHGYLLEA
WFTRALYRALLRLAPALEDVDALDAQFAASLRWLQTARCVSSLELTFAVSERLADGRVLE
RELRPGGRDLPVTDKNKKDYLERVVRWRVERGVAEQTEWLVRGFHEVVDPRLVGAFDARE
LELVIAGAPELDVADWRAHTDYRGGYHEHHPVVLWFWQAIDRFTNEQRLRLVQFVTGTSS
IPYEGFAALRGSTGPRRFCIERWGRPESLPRAHTCFNRLDLPPYPTPQLLHEKLLLAVEE
TNTFGIE
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggatcatgacgattgtgaaataagtgatcagaatacggaaacaagtgaaacc
aacggtgtgggtcacgtgaccgatgaagaagaatgtgctaaagaaggtaatgagaagggg
tccgagttacccgaagaagttgacgagggtagagatgaggcgaaagaagaggaagctgtc
tctgtgggtgccaaagaaacgggcaagctcgagtgggagttggatggattgaagtgtagg
ataaaatggaaccttccggaaggatcgacgtcgccgaaggattacatcgccttgtgttat
gcagagtcgggcggcgtcgtcgggcgcgtgccggctaccggatgcgccagcgccggcata
atgtggctgcttgatgagcccaatcagccgtacgaagattgcgagcagctgctatgtttc
cgttactacagcgggtcggagcaggagctggcatcggcggcggcgcccgcgctgccggcg
cggctgcgggccgagctgcgcaagctgccgctgcggctcaaggaaggcgtgtcgcgcaag
cgcggcggcgacgcgcccgcgccgcaggcctaccacaaccgcagcttcgagcccacggag
cccgagcccgccgacctcggccgcctcagcgacaccgtcaacagatgctcaattagcaac
ctagaaagcgacgggaacgagccgcgtcccgaaaccaaatgtgatcctagcaaaattgta
gatagtagcttaattaatgaatctcgaactgtaaatagtgaatctcgatgcgccacggac
gagccgacgtcgtcgggggtcaagaagaagtgcccgccgccggtcgacacgggcggcgcg
ccgccggacgccgccaaaaagaagtccaagatgaacggcgggctcgagtcaccgacgtcg
cccggaaccgagtattacaagatatggtcgccaaagaatccgtgtaagataatgaagttt
gtgtatgaagtggaggggggtaaggtgccggaggaggcggtcggggcgacgaaggcgggc
gggccggaggcggaggccgcggggccgccgctgccgccgcgcgccgcgcaccgccccctc
caacgctcgcgcgcgctcgagccgccgccgcaccctccccaggtcccgcgccatcgcaag
cccaagaagctcaccaaaccggaagacgccttcaccttcgagctgatcgatacggacgag
cagttcttcacggacagcaacatctccaactcggcggcgctgcagggcgggctggacgac
ttcgagccgggcgagttctacacgggcgggcaggcggccatgtcctcgacggcgagcttc
tggcgcggcggacgggacgtagcgccgctcgccacgcccgagaccgacggcagcctctgc
gagtccaccgtctcctccatcaaactatctagattaatcgatgacaagaaatcgaaagac
gtacctgacggcttccctagcgtaagtaggaatagagtgttatttattaaagatatagga
cccgataattatataaccacgacgttcgcgaggaaggacaggatgcctccgccgagtgat
acagtagacggcgcgaatctcacgccaaaccatgccaaatccgaagagaaagctcagcac
acattcttgaacgacataagcaatcattccgagttcgaggacgataatcggaaccagatc
gaggagaaggagataacgacactcaaaggtcacaaaccgctgacgagacagaactcgggg
cgagcccacacgccgaccatgatgaccgcgttcctgaactcgtcccacgtcgaccccggc
agacgagagaacggctccgacgctcccagttcctgcaactcctcgcattccacatctccc
gtcgacgagaccaacaagatgctaccgagcgtagggaccatgataatgaacaggaagtat
tcctgcgacagttcgacgccgaagcactcgagcttgccgcggcatctgctgaaaaatttg
gggtgcgaagggacgccgaagcattcgccgacgaacagtggaagtaggaccttagatagt
cccgtgcggccccacccgcgggccctgaccagggtggcggcgctgtcgggcgcggcgccg
cagtgtccgccgaccccgacgcaccacgcgcgccggccgcaccccgccactcctcccgac
ctcgctcctccccccgtcaattccgacaacagggaaaacttcgagttgctcgagtacacc
aacgaactccgaaccacagagatcaggtctccgaacatggagttcgcgaacagcaaccac
ttcacgatagttcacgcgggcccgccggacgacgtcgtgctgcggcggccgcgcccgccg
gaacacagcgatgacaacgagaacgcggtggcctcccccacgcctctgcggcacatggcc
ggaatcagattgccctcgatccctgaaagggcgtcgaggcagatggctctgactggagat
tttcctgccaatatgattggcgggatcatcgagtgcgaggaacctttacctgcagggtgg
gaggcgcgcatggacagccacgggcgcgtgttctacatcgaccacgtcagccgcagcacc
acgtggcagcggcccggcgccaacggggccgcgccgcgctcgccggcgccagaagtgcag
cggcggcagctggacaggaggtaccagtcgatccgtcgcacgatgacgcgcgcggcggac
gaggaggcgccgccggcggccgggccgtcccgcgcgccccccgccgcgccgcaccccgcc
gcggacttcctcgcgcgaccagacttctactccatccttcacatgaaccaggaagcttcc
tccctgtacaactgcaactcgacgctcaagcacatgatctccaagatccgtcgcgacacg
tcatcgttcgaccgctaccagcacaaccgcgacctggtcgcgctcgtcaacatgttcagc
gacgccgaccgcgacctgccgctcgggtgggacaccaagctggacagaaacggcaagcgc
ttcttcgtggaccacgtgatgcggcgcacgtcgttcatggacccgcggctgccgcgcgcg
gccagcgcgggccccttctcgccgctgctgccgccgcgacgacgaccgctgctcgcagaa
cagcttgacataaaatacctttgcactggagtcggaccgactttggcgccgacgccgccg
ccgcggccgccgctgtcagccggcgacgcacatgcgcggacgcaccacgagatacccgtc
gcctacaacgacaaggtggtggcgttcctccgtcagccgaacataatgtcgatcctgcgc
gagcggtgcggcgggccgggctgcgggcggggcgggcgggcgggcggcgcgctgcgcgac
aaagtgaacgccgtgcgcgtcgagggcgcgcccgcgctggcgaggtaccagcacgacgtg
cagctaacctgtatgctcagcctgttcgagcaggagatcatgagctacgtgccggcggag
gggcgcgcgtgcgcgtcgccggccgcgtctcccgcgccggcgcgcagcacgcgcgcgccc
gcgccgcagcgccgcgacttcgaggccaagctgcgcgccttctacaggaagctcgagact
aagggctacggacaggggccggggaagctcaaactccacatccgccgcgagcacctgcta
gaagacgcgttccgccgcatcatgtcctgcggcaagaaagagctgcagaaaggcaagctc
tgcgtgctctgggacggcgaggaaggcctggactatggaggcccgagccgagagttcttc
ttcctgctgtcgcgggaactcttcaacccttactacggactgttcgagtattcggcgaac
gatacttatacggtgcacgtgtcgcctatgtcggcgttcgtcgataatcatcatgaatgg
ttccgtttctccgggcgcgtgctggggctggctctggtccacgggtacctgttggaggcg
tggttcacgcgggcgctgtaccgcgcgctgctgcggctggcgccagctttagaagacgtc
gacgcgctggacgcgcagttcgccgcctcgctaaggtggctacagacagcccgctgcgtg
tcgtctttggagctgacgttcgcggtgtcggagcggctggcggacgggcgcgtgctggaa
cgggagttgcggcccggcgggcgcgacctgcccgtcaccgacaagaataagaaggactat
ctggagcgcgtcgtgcgctggcgcgtcgaacgcggcgtcgccgaacagaccgagtggctc
gtcaggggcttccacgaggtggtggacccccgcttggtgggcgcgttcgacgcgcgcgag
ctggagctggtgatcgcgggcgcgcccgagctggacgtggccgactggcgcgcgcacacc
gactaccgcggcgggtaccacgaacaccaccccgtcgtgctttggttctggcaggccatc
gacaggttcacgaacgagcagcgcttgcggctggtgcagttcgtgacggggacgtcgtcc
atcccttacgagggcttcgcggcgctgcgcgggtcgacgggcccgcggcgcttctgcatc
gagcgctggggccggccggagtcgctgccgcgcgcgcacacctgcttcaaccgcctcgac
ctccccccctaccccacgccgcagctcctccacgagaaattgctcctcgccgtcgaagaa
accaacacgttcggcatcgagtga
DBGET
integrated database retrieval system
