Choristoneura fumiferana (eastern spruce budworm): 141427888
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Entry
141427888 CDS
T11020
Name
(RefSeq) intracellular hyaluronan-binding protein 4.S-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfum03041
]
141427888
Spliceosome [BR:
cfum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
141427888
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IHABP4_N
HABP4_PAI-RBP1
Motif
Other DBs
NCBI-GeneID:
141427888
NCBI-ProteinID:
XP_073943583
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Position
5:complement(832330..834382)
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AA seq
412 aa
AA seq
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MENSYGVGVVNRYALFLDDESDPLDALKAREQAKELKKKTKEAEKENKGKPETKPKAGSV
VVRKGIKETQNVKSQDNKSGEQQKSKGPPRANDRNANAERPPPRRREERPQNGAVDNKDG
APRPPRREFGDRERRPNFERRNFNDNGEGGERRGPRPRDPRDREAPRGPRLPYDNRGKRE
FDRRSGSDKTGVKSVDKREGGGPHNWGTIKDDMEDLNKTGSEGEVVEEKPPTAAAADAGA
GAAAGFAGAGGDAAVEAPAERAPEDEVRELTLDEYRALRSAQRAAPQWNLRKAGEGEDLS
QWKNLVLLEKKKEGGDDDDSDDEYELADYPQRVGRQKRVLGIEFTFNDTARRGAAGGRGR
GRGRGRGRAAGGGPSGPPGAVREDVVPEERPAPRAHPAPPKVDDSKDFPSLG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagaattcctacggtgtgggggtcgttaacagatacgctctttttctagatgatgag
tccgatcctcttgatgcgttaaaagcgcgagagcaggctaaggagctcaaaaagaagacc
aaagaagccgaaaaggaaaataagggcaagccggaaaccaaaccgaaggccggcagcgtc
gtcgtcaggaaagggatcaaggaaacccaaaatgtgaagtcccaagacaacaagagcggc
gaacaacaaaagagtaagggaccccctcgcgcgaatgaccgcaacgccaatgcggagcgc
ccgccgccgcgccgccgagaggagcggcctcagaacggcgccgtcgacaacaaggacggc
gcgccgaggccgccgcgtcgcgagttcggcgaccgcgagcgcaggcccaacttcgagagg
cgcaatttcaacgataacggcgagggcggcgagcgccgcgggccccggcctcgcgacccg
cgcgatcgcgaagcgccgcgcggcccgcgactgccgtacgacaacagaggcaagcgcgag
ttcgacaggaggtccggctccgacaagaccggcgtcaagtccgtggacaagcgcgagggc
ggcgggccccacaactggggcaccatcaaggacgacatggaggacctgaacaagaccggc
tccgagggcgaagtggtcgaggagaagccgccgacggcggccgcggcggacgcaggcgcc
ggtgcggcggccggcttcgcgggggccggcggcgacgcggcggtcgaggcgccggccgag
cgcgcgcccgaggacgaggtgcgcgagctgacgctggacgagtaccgcgcgctgcgcagc
gcccagcgcgccgcgccgcagtggaacctgcgcaaggccggcgagggcgaggacctgtcg
cagtggaagaacctcgtgctgctcgagaagaagaaggaaggcggcgacgacgacgacagc
gacgacgagtacgagctggccgactacccgcagcgcgtgggccgccagaagcgcgtgctc
ggcatcgagttcaccttcaacgacacggcgcggcgcggcgcggccggcgggcgcgggcgc
gggcggggccgtgggcgcgggcgcgcggccggcggcggcccgtcgggcccaccgggcgcc
gtgcgcgaggacgtcgtgcccgaggagcgcccggcgccgcgcgcgcacccggcgcccccc
aaagtggacgacagcaaggatttcccctctcttggctag
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