Choristoneura fumiferana (eastern spruce budworm): 141427948
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Entry
141427948 CDS
T11020
Name
(RefSeq) uncharacterized protein
KO
K06585
integrin alpha 9
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum04512
ECM-receptor interaction
cfum04820
Cytoskeleton in muscle cells
Brite
Cell adhesion molecules [BR:
cfum04515
]
Integrins
Integrin alpha subunits
141427948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FG-GAP
FG-GAP_2
FG-GAP_3
DUF3951
OppC_N
C2_SHIP1-2_2nd
DUF6787
Motif
Other DBs
NCBI-GeneID:
141427948
NCBI-ProteinID:
XP_073943659
LinkDB
All DBs
Position
5:complement(4956568..4989710)
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AA seq
971 aa
AA seq
DB search
MWRSTCVLVLSVHLARAVFYHEPSLIELAPDDGKEHSDFGFSLGYQNGKRPNLVIGAPRY
DETGRVYQRSIEDILHGQKSCQHIDINFDDLNVTYSRNLSAHQHFYLGASIAATDNFFLT
CAPLRTWIFGKSRLGAFGACFNYTSEEKAQKLNSYGLEYTLHQKKKSFKYIYGGSGWSTL
VDKKNDKILISKSFGDVEVHLTNISKTDDHFLSLIQTFNQKKISSQFAIFAQAMTVGNYF
DAKNSETTYLAVSVKHMNAKGSIMFFNAKYEKTAWNLDDESVGTMFGVALCSADVTHDGA
DELVVGAPAQVTDTRSYDKGAVHIYTKTETPGQLQMYRKLTILGEKDGARFGTTLSTNDV
DGDSYPEILVSAPYENSGRGALYVLCGYELHQTVRKGTRKMFVSDLQRRQWIVAESYRSF
GYSVQPVTDFNDNGSDELGIGSPGSSKVILYKGIRAITARVTSRLVENMSESDSRYVFSS
CVAVKLPPKPSKITTRLLVKNIINGNNAEFDKNDATYNIDLSTGGVIIASNETEYCKNLT
IKSTSFFRVTTNVSLVDDFKVAKDFQSTWVTLSAQSDLGKQVQFTCRCNDTSCTPDYIVT
VQRSESNASTYVVGSSTLENVTISVHNRGTMGCNSCLMVRVSGTRVDLIQCHEEKGVYEC
AMPDPFRGNKTHIIDLVLRMDRLSNIDKGFTIDVEVRKNCDNPGVMQEPVTVDYVFNTDA
VLLNGTSMNANITDTQLKDETKENISDDQIYTITNTETVTWKNVWANITALKKPYSQSFN
ISIQQKVLVCIESNDTEKFYWHCPITLKPNSTTKITVTTTIIKKEIADNTQDWPITVVTQ
LSLELLPDVIIHKELKSVMMIFKELSFSQNKTLMISIGLILALILLLILGFILYKLDFFK
RKNKEELKALKTEFRRRSTRRNTTASSDDGNPNLNPERVSHFDLDNLVIEEETFFNTHPE
PNTVQNVTPAD
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgttcgacgtgtgtgctcgtgctgtcagtgcatttggcacgtgccgtgttctat
cacgagccatctctaattgaactggcgcccgatgacgggaaagagcactccgactttggc
ttcagcctggggtaccaaaatggaaaacgacccaatcttgtaattggcgcgccacgctac
gatgaaactggccgagtttaccagcgatccatagaggatattctccacggccagaaatct
tgtcaacatattgatatcaattttgacgacttaaatgtaacctacagtcggaatttaagc
gcacatcaacatttttacttgggcgcatcaatagctgccaccgacaatttttttctgact
tgtgctccactacggacctggatttttgggaaatcaaggcttggcgcgttcggagcctgc
ttcaactacactagcgaagagaaggctcaaaagctgaacagttacggattggaatacaca
ctgcaccagaaaaagaaatcatttaaatatatctacggtgggtctggttggagtaccttg
gtcgacaaaaaaaacgacaaaatcctcatatcaaagtccttcggagatgttgaagtgcat
ttgacaaatatttcaaaaaccgacgaccacttcttgtctctgatacaaacttttaatcag
aagaaaatttcgagccaatttgcaatattcgcgcaagcgatgaccgtcggaaactacttt
gacgcaaaaaactctgagaccacgtacttagctgtgagtgtgaaacacatgaacgcgaag
ggttctattatgtttttcaatgcaaaatatgagaaaactgcatggaatttggatgacgag
tcagtgggcaccatgtttggcgttgcgctgtgcagtgctgacgtcacgcacgatggcgcc
gacgagctcgtggtcggtgcgcccgcgcaagtcaccgacactcgcagctacgacaaggga
gctgtgcacatttacaccaaaactgagacccctggccaactacaaatgtaccggaagcta
acaatattgggggaaaaggacggcgcacgattcggtactactttatcgaccaacgatgta
gacggcgactcctatccagaaatactagtcagcgcgccttacgaaaactcgggcaggggt
gcgttgtacgttctgtgcggatacgaactgcatcagaccgtccgcaagggtacgcgcaag
atgtttgtgtcggatctgcagaggaggcagtggatcgtggcggagtcctacaggagcttc
gggtacagcgtgcaacccgtcacggacttcaatgacaacgggagcgacgaattaggaatt
ggttcaccaggcagctcgaaagtcatattgtataagggaatacgagctattactgcgcgt
gtaacttctagactcgtagagaatatgtcagaatccgactcccgatacgtcttttcatca
tgtgttgcagttaagctgccgccaaaaccgtcaaaaataacaacgaggttgctggtgaaa
aatataattaatggcaacaacgctgagtttgacaaaaacgatgcaacttataacatagat
ttgtcgacggggggagtgattatcgctagcaacgaaacggaatactgcaagaacttaact
attaaaagcacttccttcttcagggtgactacaaacgtatctttggttgatgatttcaaa
gttgctaaagatttccaaagcacgtgggtcacattgagtgctcagagcgatttgggcaaa
caagtgcagtttacgtgcagatgcaacgacacgagttgcacgccggactacattgtgacc
gtgcagagatctgagagtaacgcaagcacgtacgtcgtcggttcttctaccctggagaac
gtgactatctccgtccacaatcgtggcacgatgggctgcaacagctgtttgatggtccgc
gtgagtggtacgcgcgtggatctaatccagtgccatgaagaaaaaggcgtgtatgaatgc
gcgatgccggacccttttaggggaaataaaactcacataattgatctcgtactacggatg
gatagattaagcaatatcgacaaaggttttacaatcgatgtagaggttcgcaaaaattgc
gataatccaggagtcatgcaagaaccagtcacggttgattacgtatttaacactgatgcg
gtccttcttaatggaacttctatgaacgccaacattacggatacgcaactaaaggatgag
accaaagaaaatatatctgacgaccagatatacactattacaaacacggagacggtgact
tggaaaaatgtatgggctaatataactgcactcaagaaaccctacagtcaaagtttcaat
atttcaattcagcaaaaggtacttgtatgtatcgaaagcaacgatactgaaaagttctat
tggcactgccctataactctgaaaccaaattcgaccactaaaatcactgtgacaaccact
attattaaaaaggagattgcagacaatacgcaagattggccaataactgttgtaacccaa
ctatcgctagaactattgccagatgttattattcacaaagagttgaaatcagttatgatg
atcttcaaggagttgtcatttagtcaaaataaaacgcttatgataagcatcgggttgatt
ttggctctgattttgctactgattctcggcttcatactttacaagcttgatttcttcaaa
agaaaaaacaaagaagagctgaaagcgctcaaaacggaattccgaaggcggagtacgcgt
cggaatacaacagcgtcttctgacgatggaaatcctaatctaaatccggaacgtgtttcg
cacttcgatttagacaatctcgtgatagaggaagaaacattttttaacacccatccggag
ccgaacaccgtccaaaatgttacgccggccgattag
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